RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 RBM34P42696 430 aaKnown RBP6.71□□□□□ -1.34
USP48-206ENST00000464577 ART1P52961 327 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 TAS2R20P59543 309 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 LGALS3BPQ08380 585 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 CBFBQ13951 182 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 CSRP2Q16527 193 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 DUSP5Q16690 384 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 PABPC1L2AQ5JQF8 200 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 MRPL2Q5T653 305 aaKnown RBP6.71□□□□□ -1.34
USP48-206ENST00000464577 FCRLBQ6BAA4 426 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 LILRA6Q6PI73 481 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 CYB561A3Q8NBI2 242 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 OR2AK2Q8NG84 335 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 SNX33Q8WV41 574 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 OR8D1Q8WZ84 308 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 PMM1Q92871 262 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 GCDHQ92947 438 aaPredicted RBP6.71□□□□□ -1.34
USP48-206ENST00000464577 SIPA1Q96FS4 1042 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 OR1F2PQ96R84 312 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 DMRTA2Q96SC8 542 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 NPAS1Q99742 590 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 ZNF559Q9BR84 538 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 GINS4Q9BRT9 223 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 FXYD6Q9H0Q3 95 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 MCCC2Q9HCC0 563 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 MRPS30Q9NP92 439 aaKnown RBP6.71□□□□□ -1.34
USP48-206ENST00000464577 MEPEQ9NQ76 525 aaPredicted RBP6.71□□□□□ -1.34
USP48-206ENST00000464577 POT1Q9NUX5 634 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 OR5V1Q9UGF6 321 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 FBXL4Q9UKA2 621 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 COPS3Q9UNS2 423 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 KCNK7Q9Y2U2 307 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 ZNF281Q9Y2X9 895 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 DNAH12Q6ZR08 3092 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 MYOFQ9NZM1 2061 aa6.71□□□□□ -1.34
USP48-206ENST00000464577 TCRBV16S1A1N1A0A5B0 115 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GPR89AB7ZAQ6 455 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 PYCARD-AS1I3L0S3 204 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 PRICKLE3O43900 615 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 CDC123O75794 336 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 GLSO94925 669 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 STATHP02808 62 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GPR89BP0CG08 455 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 HOXB1P14653 301 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 CDK2P24941 298 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 DIO1P49895 249 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 H2BFSP57053 126 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 B2MP61769 119 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 NTHL1P78549 312 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 CDK3Q00526 305 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 STX4Q12846 297 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 SLC35D3Q5M8T2 416 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 OR7E24Q6IFN5 339 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 LRRN1Q6UXK5 716 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GLB1L2Q8IW92 636 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 SLC35F3Q8IY50 421 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 CAMKVQ8NCB2 501 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 PXT1Q8NFP0 134 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 OR5M1Q8NGP8 315 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 OR6N1Q8NGY5 312 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 OR51A7Q8NH64 312 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GAL3ST3Q96A11 431 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 ARMC5Q96C12 935 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 ZMYND19Q96E35 227 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 WDR89Q96FK6 387 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 SCLYQ96I15 445 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 PDCD1LG2Q9BQ51 273 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 ZNF426Q9BUY5 554 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 SLC25A18Q9H1K4 315 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 C6orf106Q9H6K1 298 aaPredicted RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 TMEM27Q9HBJ8 222 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 PRDM9Q9NQV7 894 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 RNF186Q9NXI6 227 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 TAS2R8Q9NYW2 309 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 CHRNA9Q9UGM1 479 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 APOBEC3BQ9UH17 382 aaKnown RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 GNG8Q9UK08 70 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 MDC1Q14676 2089 aaKnown RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 SCN5AQ14524 2016 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 A0A0B4J2E0 115 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 EDDM13A0A1B0GTR0 161 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 A0A1B0GX12 115 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GXYLT2A0PJZ3 443 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 RFPL4AA6NLU0 287 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 RFPL4AL1F8VTS6 287 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 H3BUI4 141 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 H7C417 338 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GOSR2O14653 212 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 AK1P00568 194 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GYPBP06028 91 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 CSF1P09603 554 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 GKN3PP0CG01 181 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 MGMTP16455 207 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 TM4SF4P48230 202 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 TNFRSF17Q02223 184 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 EIF2B5Q13144 721 aaKnown RBP6.7□□□□□ -1.34
USP48-206ENST00000464577 FHL1Q13642 323 aa6.7□□□□□ -1.34
USP48-206ENST00000464577 TEAD2Q15562 447 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms