RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 POMGNT2Q8NAT1 580 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 OR9K2Q8NGE7 335 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 OR52E4Q8NGH9 312 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC35B4Q969S0 331 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 ADAD1Q96M93 576 aaKnown RBP12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 OR52B2Q96RD2 323 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 SPATA9Q9BWV2 254 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 CACYBPQ9HB71 228 aaKnown RBP12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 BCL2L10Q9HD36 194 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 SLC17A5Q9NRA2 495 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 CBLN4Q9NTU7 201 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 ZNF443Q9Y2A4 671 aaPredicted RBP12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 B3GALT5Q9Y2C3 310 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 IFT52Q9Y366 437 aa12.61□□□□□ -0.39
SNRNP40-203ENST00000463988 FAM234BA2RU67 622 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 NDUFS7O75251 213 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 CRLF1O75462 422 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 ERLIN1O75477 346 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 AKR7A3O95154 331 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 BCHEP06276 602 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 BMP2P12643 396 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 PAX7P23759 505 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 MRPL19P49406 292 aaKnown RBP12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 FOXG1P55316 489 aaPredicted RBP12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 DMTNQ08495 405 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 OR7A5Q15622 319 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 AAED1Q7RTV5 226 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 ABHD12BQ7Z5M8 362 aaPredicted RBP12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 FBXL14Q8N1E6 418 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 CLIP4Q8N3C7 705 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 STK35Q8TDR2 534 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 GTF2H4Q92759 462 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 VPS33AQ96AX1 596 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 TMEM19Q96HH6 336 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 TAPBPLQ9BX59 468 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 FKRPQ9H9S5 495 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 TMBIM4Q9HC24 238 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 POU2F3Q9UKI9 436 aa12.6□□□□□ -0.39
SNRNP40-203ENST00000463988 HEATR1Q9H583 2144 aaKnown RBP12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 A0A1W2PR80 420 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 OR6C65A6NJZ3 312 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 M0R1B8 84 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 NPIPB7O75200 414 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 P2RY4P51582 365 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 DSCR9P59020 149 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 PRPS1P60891 318 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 FADDQ13158 208 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 RGNQ15493 299 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 GTDC1Q4AE62 458 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 C6orf10Q5SRN2 563 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 TMEM225Q6GV28 225 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 EPGNQ6UW88 154 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 MUC15Q8N387 334 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 OR9I1Q8NGQ6 314 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 AURKBQ96GD4 344 aaPredicted RBP12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 ZNF385AQ96PM9 386 aaKnown RBP12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 CACNG6Q9BXT2 260 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 A4GALTQ9NPC4 353 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
SNRNP40-203ENST00000463988 KIAA1324LA8MWY0 1029 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 TMEM229AB2RXF0 380 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 H7C417 338 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 CLIC1O00299 241 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 TLX2O43763 284 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 TGDSO95455 350 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 WNT11O96014 354 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 TP53P04637 393 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 PRG2P13727 222 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 NCF2P19878 526 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 FABP6P51161 128 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 IRX1P78414 480 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 SPOCK1Q08629 439 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 BNIP2Q12982 314 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 BEND6Q5SZJ8 279 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 C9orf135Q5VTT2 229 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 B3GLCTQ6Y288 498 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 GPAT4Q86UL3 456 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 MAPK1IP1LQ8NDC0 245 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 OR10H5Q8NGA6 315 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 MFSD8Q8NHS3 518 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 C3orf49Q96BT1 292 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 RHNO1Q9BSD3 238 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 RASD1Q9Y272 281 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 USH1CQ9Y6N9 552 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 MXRA5Q9NR99 2828 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 STAB1Q9NY15 2570 aa12.58□□□□□ -0.4
SNRNP40-203ENST00000463988 CR1P17927 2039 aa12.57□□□□□ -0.4
SNRNP40-203ENST00000463988 FRS3O43559 492 aa12.57□□□□□ -0.4
SNRNP40-203ENST00000463988 CD5LO43866 347 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms