RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 MGARPQ8TDB4 240 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 ADAMTS15Q8TE58 950 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 LRTOMTQ8WZ04 291 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 ZNF524Q96C55 264 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 ZG16BQ96DA0 208 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 HES6Q96HZ4 224 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 ALKBH3Q96Q83 286 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-211ENST00000463372 SERHL2Q9H4I8 314 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 IPPKQ9H8X2 491 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 PATZ1Q9HBE1 687 aaKnown RBP11.2□□□□□ -0.62
C9orf3-211ENST00000463372 EGFL7Q9UHF1 273 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 GRID1Q9ULK0 1009 aa11.2□□□□□ -0.62
C9orf3-211ENST00000463372 UBXN8O00124 270 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 ETV2O00321 342 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-211ENST00000463372 NKX2-2O95096 273 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 SBK2P0C263 348 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 BCKDHAP12694 445 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 LMO1P25800 156 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 GABRA5P31644 462 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 SERPINB4P48594 390 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 SH3BGRP55822 239 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-211ENST00000463372 MERTKQ12866 999 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 HEPACAMQ14CZ8 416 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 TSTQ16762 297 aaKnown RBP11.19□□□□□ -0.62
C9orf3-211ENST00000463372 SGO1Q5FBB7 561 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 ADAMTSL5Q6ZMM2 481 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 FRRS1Q6ZNA5 592 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 RAPH1Q70E73 1250 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 MDP1Q86V88 176 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 POU5F2Q8N7G0 328 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 OR5W2Q8NH69 310 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-211ENST00000463372 NAT9Q9BTE0 207 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 DPAGT1Q9H3H5 408 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 NELFAQ9H3P2 528 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 ALG9Q9H6U8 611 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 CNTD2Q9H8S5 307 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 FBLN5Q9UBX5 448 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 FOXJ3Q9UPW0 622 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 HDGFL3Q9Y3E1 203 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 PSAT1Q9Y617 370 aa11.19□□□□□ -0.62
C9orf3-211ENST00000463372 EIF1BO60739 113 aaKnown RBP11.18□□□□□ -0.62
C9orf3-211ENST00000463372 IER3P46695 156 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 GTF2H2Q13888 395 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 SLC17A1Q14916 467 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 NDUFAF6Q330K2 333 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 GTF2H2CQ6P1K8 395 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 CNGA4Q8IV77 575 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 CMIPQ8IY22 773 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 C1orf52Q8N6N3 182 aaKnown RBP11.18□□□□□ -0.62
C9orf3-211ENST00000463372 ATP6V1E2Q96A05 226 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 ELP4Q96EB1 424 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 NEURL3Q96EH8 262 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 MAP6Q96JE9 813 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 CDK15Q96Q40 435 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 NMRK1Q9NWW6 199 aa11.18□□□□□ -0.62
C9orf3-211ENST00000463372 GNG14A0A1W2PPG7 69 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 SLC22A23A1A5C7 686 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-211ENST00000463372 HSPA4LO95757 839 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 KRT14P02533 472 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 MT-ND5P03915 603 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 OR12D1P0DN82 309 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 ZNF35P13682 527 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 TGFBR2P37173 567 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 PCBP3P57721 371 aaKnown RBP11.17□□□□□ -0.62
C9orf3-211ENST00000463372 GNB2P62879 340 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 H3F3AP84243 136 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 TBX2Q13207 712 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-211ENST00000463372 FXNQ16595 210 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 RNASEH2BQ5TBB1 312 aaKnown RBP11.17□□□□□ -0.62
C9orf3-211ENST00000463372 ZBTB37Q5TC79 503 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 ZFAND6Q6FIF0 208 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 TRMT10BQ6PF06 316 aaKnown RBP11.17□□□□□ -0.62
C9orf3-211ENST00000463372 C11orf88Q6PI97 169 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 GOLGA7Q7Z5G4 137 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 CCDC170Q8IYT3 715 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 CDRT4Q8N9R6 151 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 WFDC9Q8NEX5 89 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 TMEM234Q8WY98 164 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 ST8SIA1Q92185 356 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 TSPAN17Q96FV3 270 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 ZNF385AQ96PM9 386 aaKnown RBP11.17□□□□□ -0.62
C9orf3-211ENST00000463372 ELOVL6Q9H5J4 265 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 NANOGQ9H9S0 305 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 CAB39LQ9H9S4 337 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 SLCO1C1Q9NYB5 712 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 GRHL1Q9NZI5 618 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 KIF17Q9P2E2 1029 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 NFU1Q9UMS0 254 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 NPTNQ9Y639 398 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 USH1CQ9Y6N9 552 aa11.17□□□□□ -0.62
C9orf3-211ENST00000463372 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
C9orf3-211ENST00000463372 ZNF503-AS2A6NEH8 195 aa11.16□□□□□ -0.62
C9orf3-211ENST00000463372 ANKRD61A6NGH8 418 aa11.16□□□□□ -0.62
C9orf3-211ENST00000463372 BANF1O75531 89 aa11.16□□□□□ -0.62
C9orf3-211ENST00000463372 WISP3O95389 354 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-211ENST00000463372 PRPS2P11908 318 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms