RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 C12orf10Q9HB07 376 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 LIPT2A6NK58 231 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 TMEM229AB2RXF0 380 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 SMAD7O15105 426 aaKnown RBP16.28■□□□□ 0.2
COL9A2-205ENST00000461118 GPIP06744 558 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 FPR1P21462 350 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 IDUAP35475 653 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 GZMMP51124 257 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 HOXC5Q00444 222 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 CAPRIN1Q14444 709 aaKnown RBP16.28■□□□□ 0.2
COL9A2-205ENST00000461118 ACKR1Q16570 336 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 SFRP5Q5T4F7 317 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 ANKRD34AQ69YU3 496 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 PAQR6Q6TCH4 344 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 C6orf89Q6UWU4 347 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 Q6ZT83 130 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 CXXC5Q7LFL8 322 aaKnown RBP16.28■□□□□ 0.2
COL9A2-205ENST00000461118 ARMC8Q8IUR7 673 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 CCDC103Q8IW40 242 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 STEAP2Q8NFT2 490 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 SPATA3Q8NHX4 192 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 STK35Q8TDR2 534 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 ZNF775Q96BV0 537 aaPredicted RBP16.28■□□□□ 0.2
COL9A2-205ENST00000461118 LRRC58Q96CX6 371 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 DNAJA3Q96EY1 480 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 HS3ST6Q96QI5 342 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 SH3GL1Q99961 368 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 BDH2Q9BUT1 245 aa16.28■□□□□ 0.2
COL9A2-205ENST00000461118 CUBNO60494 3623 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 FXYD1O00168 92 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 RAMP1O60894 148 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 THBDP07204 575 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 AQP1P29972 269 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 DMTNQ08495 405 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 BNIP2Q12982 314 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 ITGADQ13349 1161 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 MMEL1Q495T6 779 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 OR8J3Q8NGG0 315 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 OR10A6Q8NH74 314 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 USB1Q9BQ65 265 aaKnown RBP16.27■□□□□ 0.2
COL9A2-205ENST00000461118 TRIM2Q9C040 744 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 ACTR6Q9GZN1 396 aa16.27■□□□□ 0.2
COL9A2-205ENST00000461118 PRR14LQ5THK1 2151 aa16.27■□□□□ 0.19
COL9A2-205ENST00000461118 STAB1Q9NY15 2570 aa16.27■□□□□ 0.19
COL9A2-205ENST00000461118 CR1P17927 2039 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 LOC100653049A0A140TA62 436 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 M0QX08 132 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 MRASO14807 208 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 KRT34O76011 436 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 ADAP00813 363 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 C8BP07358 591 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 HTR2AP28223 471 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 NTF4P34130 210 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 CEACAM7Q14002 265 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 SLC17A1Q14916 467 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 C1orf140Q5VVS0 124 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 REP15Q6BDI9 236 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 PATL1Q86TB9 770 aaKnown RBP16.26■□□□□ 0.19
COL9A2-205ENST00000461118 CALHM3Q86XJ0 350 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 PCYOX1LQ8NBM8 494 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 DNAJA4Q8WW22 397 aaPredicted RBP16.26■□□□□ 0.19
COL9A2-205ENST00000461118 PIK3IP1Q96FE7 263 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 PERPQ96FX8 193 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 PIF1Q9H611 641 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 RPS6KB2Q9UBS0 482 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 TESQ9UGI8 421 aaKnown RBP16.26■□□□□ 0.19
COL9A2-205ENST00000461118 PRSS50Q9UI38 385 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 NOSIPQ9Y314 301 aaKnown RBP16.26■□□□□ 0.19
COL9A2-205ENST00000461118 CAPN7Q9Y6W3 813 aa16.26■□□□□ 0.19
COL9A2-205ENST00000461118 SONP18583 2426 aaKnown RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 USF3Q68DE3 2245 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 A0A1B0GWA3 101 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 KLF4O43474 513 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 LGI1O95970 557 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 EDNRAP25101 427 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 PCGF2P35227 344 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 EGR4Q05215 589 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 OR7A5Q15622 319 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 DUSP7Q16829 419 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 VMACQ2NL98 169 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 RABL3Q5HYI8 236 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 OTUD3Q5T2D3 398 aaPredicted RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 INTS11Q5TA45 600 aaKnown RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 FAM91A1Q658Y4 838 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 ULK3Q6PHR2 472 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 C5orf46Q6UWT4 87 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 CCDC80Q76M96 950 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 LSRQ86X29 649 aaPredicted RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 SNX32Q86XE0 403 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 ZNF100Q8IYN0 542 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 MFSD8Q8NHS3 518 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 RP9Q8TA86 221 aaKnown RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 ZC3HAV1LQ96H79 300 aaKnown RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 CCL19Q99731 98 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 SF3B5Q9BWJ5 86 aaKnown RBP16.25■□□□□ 0.19
COL9A2-205ENST00000461118 TAPBPLQ9BX59 468 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 UBTD1Q9HAC8 227 aa16.25■□□□□ 0.19
COL9A2-205ENST00000461118 PARPBPQ9NWS1 579 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms