RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SH3GLB1Q9Y371 365 aa11.8□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ANKHD1Q8IWZ3 2542 aaKnown RBP11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 B2RBV5 119 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 OR2T1O43869 369 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CYTIPO60759 359 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 YES1P07947 543 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CALB2P22676 271 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 HTR2AP28223 471 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 IFNA8P32881 189 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 UGT2B10P36537 528 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 SELENOWP63302 87 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 SLC25A3Q00325 362 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 BNIP2Q12982 314 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CYBRD1Q53TN4 286 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 C1orf140Q5VVS0 124 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 COMTD1Q86VU5 262 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 OR6T1Q8NGN1 323 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 OR6K3Q8NGY3 331 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 VANGL1Q8TAA9 524 aaPredicted RBP11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PIGXQ8TBF5 258 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 FAM162AQ96A26 154 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TPD52L3Q96J77 140 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 POLR2J2Q9GZM3 115 aaKnown RBP11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 POLR2J3Q9H1A7 115 aaKnown RBP11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PLSCR4Q9NRQ2 329 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TESMINQ9Y4I5 508 aa11.79□□□□□ -0.52
RAB11FIP3-207ENST00000461009 IGHV3-15A0A0B4J1V0 119 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 A0A0B4J2E0 115 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 A0A1B0GX12 115 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TRAPPC13A5PLN9 417 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TMEM229AB2RXF0 380 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 GPR171O14626 319 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TPST2O60704 377 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 AHSA1O95433 338 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 HRGP04196 525 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PPP3CBP16298 524 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 FPR1P21462 350 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CRYBA2P53672 197 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CEACAM7Q14002 265 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PDK3Q15120 406 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 POU4F3Q15319 338 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 GUSBP1Q15486 140 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 DEFB113Q30KQ7 82 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ENTPD8Q5MY95 495 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 GLYATQ6IB77 296 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PAQR6Q6TCH4 344 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TRPM8Q7Z2W7 1104 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CARM1Q86X55 608 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 TUSC5Q8IXB3 177 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 DEFB107AQ8IZN7 70 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ZNF610Q8N9Z0 462 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ABHD3Q8WU67 409 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 WFIKKN1Q96NZ8 548 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 EPYCQ99645 322 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 KLHL4Q9C0H6 718 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PCDHAC1Q9H158 963 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PLEKHF2Q9H8W4 249 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 EMC3Q9P0I2 261 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 KLHL13Q9P2N7 655 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 RPS6KA6Q9UK32 745 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CLEC4AQ9UMR7 237 aa11.78□□□□□ -0.52
RAB11FIP3-207ENST00000461009 F8P00451 2351 aa11.77□□□□□ -0.52
RAB11FIP3-207ENST00000461009 SPG11Q96JI7 2443 aa11.77□□□□□ -0.52
RAB11FIP3-207ENST00000461009 A0A087WUJ7 227 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 LIPT2A6NK58 231 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CPSF4LA6NMK7 179 aaKnown RBP11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF724A8MTY0 619 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 SMAD9O15198 467 aaKnown RBP11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 NPIPB7O75200 414 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ATE1O95260 518 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ZNF682O95780 498 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CGAP01215 116 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 IMPDH2P12268 514 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 HSD17B1P14061 328 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 GGT1P19440 569 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 GTF2E2P29084 291 aaKnown RBP11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CDH12P55289 794 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MFSD13AQ14CX5 517 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 OR7A5Q15622 319 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 EXOC3L2Q2M3D2 409 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 BEND4Q6ZU67 534 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ARHGAP24Q8N264 748 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MFSD8Q8NHS3 518 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 ADAMTS16Q8TE57 1224 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 DNAJA3Q96EY1 480 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 MPP4Q96JB8 637 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 WFDC6Q9BQY6 131 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TMEM43Q9BTV4 400 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 BCO1Q9HAY6 547 aa11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
RAB11FIP3-207ENST00000461009 TRAV36DV7A0A075B6V5 113 aa11.76□□□□□ -0.53
RAB11FIP3-207ENST00000461009 CHP2O43745 196 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms