RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ITGA5P08648 1049 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 PAX1P15863 534 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 P2RY4P51582 365 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 SCARB2Q14108 478 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 ADRM1Q16186 407 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 DHRS4L2Q6PKH6 230 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 YTHDF3Q7Z739 585 aaKnown RBP16.66■□□□□ 0.26
COL5A1-203ENST00000460264 ZIC4Q8N9L1 334 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 KBTBD8Q8NFY9 601 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 OR52E4Q8NGH9 312 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 STK35Q8TDR2 534 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 NEUROG1Q92886 237 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 FBXW5Q969U6 566 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 TMEM45BQ96B21 275 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 C18orf12Q96KH6 178 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 SF3B5Q9BWJ5 86 aaKnown RBP16.66■□□□□ 0.26
COL5A1-203ENST00000460264 TAPBPLQ9BX59 468 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 CXorf56Q9H5V9 222 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 ZNF701Q9NV72 531 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-203ENST00000460264 LEF1Q9UJU2 399 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-203ENST00000460264 TRIM33Q9UPN9 1127 aa16.66■□□□□ 0.26
COL5A1-203ENST00000460264 PLCE1Q9P212 2302 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 NSD1Q96L73 2696 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-203ENST00000460264 CCT8L1PA6NM43 557 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 EVPLLA8MZ36 301 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 TPST1O60507 370 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 HTR2AP28223 471 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 ZNF672Q499Z4 452 aaPredicted RBP16.65■□□□□ 0.26
COL5A1-203ENST00000460264 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 DHDDSQ86SQ9 333 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 DPP10Q8N608 796 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 Q96MF0 132 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 SIKE1Q9BRV8 207 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 SPATA5L1Q9BVQ7 753 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 TRIM2Q9C040 744 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 AMBRA1Q9C0C7 1298 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 SLC7A10Q9NS82 523 aa16.65■□□□□ 0.26
COL5A1-203ENST00000460264 A0A0G2JND7 137 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 ELOA3DA6NLF2 546 aaPredicted RBP16.64■□□□□ 0.25
COL5A1-203ENST00000460264 AHSA1O95433 338 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 SLC6A2P23975 617 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 AQP1P29972 269 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 EGR4Q05215 589 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 GABRA6Q16445 453 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 ELOA3BQ3SY89 546 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 RUNDC3AQ59EK9 446 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 TSPO2Q5TGU0 170 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 OR7E24Q6IFN5 339 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 BIVMQ86UB2 503 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 GPAT4Q86UL3 456 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 RETREG3Q86VR2 466 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 LSMEM1Q8N8F7 131 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 ELOA3Q8NG57 546 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 OR52N5Q8NH56 324 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 MUS81Q96NY9 551 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 ZNF385AQ96PM9 386 aaKnown RBP16.64■□□□□ 0.25
COL5A1-203ENST00000460264 PTDSS2Q9BVG9 487 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 PIF1Q9H611 641 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 UPB1Q9UBR1 384 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 RPS6KB2Q9UBS0 482 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 LAMP3Q9UQV4 416 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 NDUFAF1Q9Y375 327 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 SLC25A15Q9Y619 301 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 ZANQ9Y493 2812 aa16.64■□□□□ 0.25
COL5A1-203ENST00000460264 A0A1B0GWA3 101 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 SHISA9B4DS77 424 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 FTCDNL1E5RQL4 147 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 ANGPT2O15123 496 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 SOD3P08294 240 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 INHBBP09529 407 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 DANCRP0C864 163 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 RPS4XP62701 263 aaKnown RBP16.63■□□□□ 0.25
COL5A1-203ENST00000460264 C9orf135Q5VTT2 229 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 TMEM225Q6GV28 225 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 AAED1Q7RTV5 226 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 PTOV1Q86YD1 416 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 HIPK4Q8NE63 616 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 C1orf162Q8NEQ5 155 aaPredicted RBP16.63■□□□□ 0.25
COL5A1-203ENST00000460264 MFSD8Q8NHS3 518 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 KTI12Q96EK9 354 aaPredicted RBP16.63■□□□□ 0.25
COL5A1-203ENST00000460264 COX4I2Q96KJ9 171 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 ANKRD27Q96NW4 1050 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 ZNF607Q96SK3 696 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 CGREF1Q99674 301 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 SMR3AQ99954 134 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 SLCO5A1Q9H2Y9 848 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 C12orf10Q9HB07 376 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 ANGPT4Q9Y264 503 aa16.63■□□□□ 0.25
COL5A1-203ENST00000460264 A0A1W2PR80 420 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 PRORSD1PA6NEY8 169 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 ABCD4O14678 606 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 FZD7O75084 574 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 VAMP5O95183 116 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 RPS5P46782 204 aaKnown RBP16.62■□□□□ 0.25
COL5A1-203ENST00000460264 MTPNP58546 118 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 SELPLGQ14242 412 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 METTL21CQ5VZV1 264 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 CREB3L2Q70SY1 520 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms