RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 PNMTP11086 282 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 CD247P20963 164 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 CRYGSP22914 178 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 EDNRAP25101 427 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 EGR4Q05215 589 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 VEZF1Q14119 521 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 FAM91A1Q658Y4 838 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 Q6ZT83 130 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 C22orf34Q6ZV56 151 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 TMEM99Q8N816 258 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 ANKS4BQ8N8V4 417 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 RNF217Q8TC41 542 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 RASSF5Q8WWW0 418 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 SLC47A1Q96FL8 570 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 MCHR1Q99705 422 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 ACTR6Q9GZN1 396 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 OR10A4Q9H209 315 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 C6orf203Q9P0P8 240 aaPredicted RBP18.38■□□□□ 0.53
VARS-218ENST00000459667 TACC2O95359 2948 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 CREBBPQ92793 2442 aa18.38■□□□□ 0.53
VARS-218ENST00000459667 AQP7P3A6NL99 342 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 CCT8L1PA6NM43 557 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 SHOX2O60902 331 aaPredicted RBP18.37■□□□□ 0.53
VARS-218ENST00000459667 ADAP00813 363 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 RPS5P46782 204 aaKnown RBP18.37■□□□□ 0.53
VARS-218ENST00000459667 CRYBA2P53672 197 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 SLC17A1Q14916 467 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 P2RY6Q15077 328 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 C5orf46Q6UWT4 87 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 STEAP2Q8NFT2 490 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 OR2T12Q8NG77 320 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 OR6T1Q8NGN1 323 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 MFSD8Q8NHS3 518 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 VANGL1Q8TAA9 524 aaPredicted RBP18.37■□□□□ 0.53
VARS-218ENST00000459667 APH1AQ96BI3 265 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 KTI12Q96EK9 354 aaPredicted RBP18.37■□□□□ 0.53
VARS-218ENST00000459667 PTDSS2Q9BVG9 487 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 HDHD5Q9BXW7 423 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 SLC9A8Q9Y2E8 581 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 FLVCR1Q9Y5Y0 555 aa18.37■□□□□ 0.53
VARS-218ENST00000459667 ANKRD17O75179 2603 aaKnown RBP18.36■□□□□ 0.53
VARS-218ENST00000459667 FMO6PO60774 539 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 MRPL33O75394 65 aaKnown RBP18.36■□□□□ 0.53
VARS-218ENST00000459667 IFNA14P01570 189 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 IL32P24001 234 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 GTF2E2P29084 291 aaKnown RBP18.36■□□□□ 0.53
VARS-218ENST00000459667 TSC22D1Q15714 1073 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 NPTX1Q15818 432 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 SFRP5Q5T4F7 317 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 CCDC197Q8NCU1 140 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 KISS1RQ969F8 398 aaPredicted RBP18.36■□□□□ 0.53
VARS-218ENST00000459667 SLC38A4Q969I6 547 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 S100PBPQ96BU1 408 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 SLC25A36Q96CQ1 311 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 SF3B5Q9BWJ5 86 aaKnown RBP18.36■□□□□ 0.53
VARS-218ENST00000459667 CMTM6Q9NX76 183 aa18.36■□□□□ 0.53
VARS-218ENST00000459667 CSMD2Q7Z408 3487 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 IGKV1D-42A0A075B6H8 117 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 ELOVL7A1L3X0 281 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 CPSF4LA6NMK7 179 aaKnown RBP18.35■□□□□ 0.53
VARS-218ENST00000459667 DEFB108AA8MXU0 73 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 FTCDNL1E5RQL4 147 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 SIAH2O43255 324 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 CNOT4O95628 575 aaKnown RBP18.35■□□□□ 0.53
VARS-218ENST00000459667 IGHV3-9P01782 118 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 THBDP07204 575 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 NTF4P34130 210 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 SLC7A2P52569 658 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 CDH12P55289 794 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 ITGADQ13349 1161 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 SWT1Q5T5J6 900 aaKnown RBP18.35■□□□□ 0.53
VARS-218ENST00000459667 TMEM225Q6GV28 225 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 CASP12Q6UXS9 341 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 GPAT4Q86UL3 456 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 RBM45Q8IUH3 476 aaKnown RBP18.35■□□□□ 0.53
VARS-218ENST00000459667 SLC15A3Q8IY34 581 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 MICU2Q8IYU8 434 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 UBE2J2Q8N2K1 259 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 OR4D11Q8NGI4 311 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 PROX1Q92786 737 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 PIK3IP1Q96FE7 263 aa18.35■□□□□ 0.53
VARS-218ENST00000459667 ABCA4P78363 2273 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 TRAV36DV7A0A075B6V5 113 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 A0A087WUJ7 227 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 OR2T1O43869 369 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 DNAJA1P31689 397 aaKnown RBP18.34■□□□□ 0.53
VARS-218ENST00000459667 P2RY4P51582 365 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 LRRC23Q53EV4 343 aaPredicted RBP18.34■□□□□ 0.53
VARS-218ENST00000459667 ENTPD8Q5MY95 495 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 FAM69AQ5T7M9 428 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 FBXW9Q5XUX1 488 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 ZNF613Q6PF04 617 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 BHLHA15Q7RTS1 189 aaPredicted RBP18.34■□□□□ 0.53
VARS-218ENST00000459667 WFDC8Q8IUA0 241 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 P3H2Q8IVL5 708 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 OR9K2Q8NGE7 335 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 TAAR8Q969N4 342 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 LIME1Q9H400 295 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 PARPBPQ9NWS1 579 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 TAGLN3Q9UI15 199 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms