RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CLIC3O95833 236 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ACTL6AO96019 429 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PLGP00747 810 aaPredicted RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 HLA-DQA2P01906 255 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ATP6V1B1P15313 513 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 NME2P22392 152 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TCEA1P23193 301 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CRABP1P29762 137 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SFTPDP35247 375 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 EIF2S3P41091 472 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CAPZA2P47755 286 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 DNASE1L1P49184 302 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 MEOX1P50221 254 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 EFNA3P52797 238 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 GPR85P60893 370 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SNRPGP62308 76 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PPIAP62937 165 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TUBA4AP68366 448 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CDK5Q00535 292 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 MVKQ03426 396 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PUDPQ08623 228 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 Q0VFX4 171 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CDK5R2Q13319 367 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMED1Q13445 227 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CAMK2BQ13554 666 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF74Q16587 644 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 OCLNQ16625 522 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PGGHGQ32M88 737 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PLPPR5Q32ZL2 321 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 KLHL12Q53G59 568 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEM236Q5W0B7 351 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC6A19Q695T7 634 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 HBMQ6B0K9 141 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF770Q6IQ21 691 aaPredicted RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF544Q6NX49 715 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 APOOLQ6UXV4 268 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 LINC00114Q6XXX2 140 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMPRSS11AQ6ZMR5 421 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ZNF620Q6ZNG0 422 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ESPNLQ6ZVH7 1005 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CXXC5Q7LFL8 322 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 GALNTL5Q7Z4T8 443 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TSEN54Q7Z6J9 526 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ADCK1Q86TW2 530 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 GPAT4Q86UL3 456 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ADGRG3Q86Y34 549 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SULF2Q8IWU5 870 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CHERPQ8IWX8 916 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 UEVLDQ8IX04 471 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 GTPBP8Q8N3Z3 284 aaPredicted RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 LNX2Q8N448 690 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 FAM26EQ8N5C1 309 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR13C2Q8NGS9 318 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 OR2T4Q8NH00 348 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 C9orf43Q8TAL5 461 aaPredicted RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEM163Q8TC26 289 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 RORBQ92753 470 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CRELD1Q96HD1 420 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 LRR1Q96L50 414 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 FRMD6Q96NE9 622 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TNFRSF13CQ96RJ3 184 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 MBOAT4Q96T53 435 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PITX2Q99697 317 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PRSS27Q9BQR3 290 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 COPS4Q9BT78 406 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 KCNN2Q9H2S1 579 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 UBQLN3Q9H347 655 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 RERGLQ9H628 205 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 EGLN3Q9H6Z9 239 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC25A19Q9HC21 320 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CHST11Q9NPF2 352 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 MAN2C1Q9NTJ4 1040 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 ALKBH4Q9NXW9 302 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PLA2G3Q9NZ20 509 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 WARS2Q9UGM6 360 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEFF2Q9UIK5 374 aaPredicted RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 MCTS1Q9ULC4 181 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 RASD1Q9Y272 281 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 SIGLEC7Q9Y286 467 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 CHST2Q9Y4C5 530 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 PCDHGA9Q9Y5G4 932 aaKnown RBP5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 NOX1Q9Y5S8 564 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 IER3IP1Q9Y5U9 82 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 KCNMB2Q9Y691 235 aa5.29□□□□□ -1.56
RNU1-88P-201ENST00000459274 EP300Q09472 2414 aaPredicted RBP5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 DAPL1A0PJW8 107 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 TMEM72A0PK05 275 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 SLC1A7O00341 560 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 EIF1AYO14602 144 aaKnown RBP5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 GPR171O14626 319 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 ARPC3O15145 178 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 ARHGEF9O43307 516 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 DNPH1O43598 174 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 AHCYL1O43865 530 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 PPP1R3DO95685 299 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 PMS2P2O95744 297 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 RAB36O95755 333 aa5.28□□□□□ -1.56
RNU1-88P-201ENST00000459274 F10P00742 488 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms