RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ZNF232Q9UNY5 417 aa13.85□□□□□ -0.19
CHCHD3-204ENST00000457942 HEATR1Q9H583 2144 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 CDHR4A6H8M9 788 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 C5orf58C9J3I9 102 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 KRT33AO76009 404 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 AKR7A3O95154 331 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 ITGA5P08648 1049 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 CDH2P19022 906 aaPredicted RBP13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 PTAFRP25105 342 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 FOXG1P55316 489 aaPredicted RBP13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 H3F3AP84243 136 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 TGFBR3Q03167 851 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 BNIP2Q12982 314 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 GABRA6Q16445 453 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 CHRFAM7AQ494W8 412 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 MAVSQ7Z434 540 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 HIPK1Q86Z02 1210 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 GOLGA6L1Q8N7Z2 621 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC38A5Q8WUX1 472 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 RAD21L1Q9H4I0 556 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 SDR39U1Q9NRG7 319 aaPredicted RBP13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 THUMPD1Q9NXG2 353 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 SLC25A15Q9Y619 301 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 USH1CQ9Y6N9 552 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 DSPPQ9NZW4 1301 aa13.84□□□□□ -0.19
CHCHD3-204ENST00000457942 PLCE1Q9P212 2302 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 POLR3GO15318 223 aaPredicted RBP13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 CD5LO43866 347 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 NDUFS7O75251 213 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 F12P00748 615 aaPredicted RBP13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 ZCCHC18P0CG32 403 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 CD40P25942 277 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 NTF4P34130 210 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 NUDT6P53370 316 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 MVDP53602 400 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 SLC17A1Q14916 467 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 MAPK11Q15759 364 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 ZSWIM7Q19AV6 140 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 KRTAP24-1Q3LI83 254 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 TSPO2Q5TGU0 170 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 RNF220Q5VTB9 566 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 FBXL14Q8N1E6 418 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 TMEM99Q8N816 258 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 OR9K2Q8NGE7 335 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 ADAD1Q96M93 576 aaKnown RBP13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 CACNG6Q9BXT2 260 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 ADAM19Q9H013 955 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 SLC7A10Q9NS82 523 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 DCTN4Q9UJW0 460 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 GDF2Q9UK05 429 aaPredicted RBP13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 AMDHD2Q9Y303 409 aa13.83□□□□□ -0.2
CHCHD3-204ENST00000457942 A0A0G2JPF8 293 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 FAM234BA2RU67 622 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 LIPT2A6NK58 231 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 AQP7P3A6NL99 342 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 A8MVM7 634 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 HNRNPCL3B7ZW38 293 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 SSX4O60224 188 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 AHSA1O95433 338 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 THBS1P07996 1170 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 TFPTP0C1Z6 253 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 HNRNPCL4P0DMR1 293 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 PRG2P13727 222 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 FABP6P51161 128 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 NRF1Q16656 503 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 ZNF311Q5JNZ3 666 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 PRAMEF8Q5VWM4 474 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 PRAMEF7Q5VXH5 474 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 TMEM225Q6GV28 225 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 SLC2A7Q6PXP3 512 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 ABHD12BQ7Z5M8 362 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 SERPINA11Q86U17 422 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 DTX2Q86UW9 622 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 CLIP4Q8N3C7 705 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 C17orf78Q8N4C9 275 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 C1orf162Q8NEQ5 155 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 LRRC8CQ8TDW0 803 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 TMEM45BQ96B21 275 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 MUS81Q96NY9 551 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 DHRS9Q9BPW9 319 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 SPATA9Q9BWV2 254 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 RPS6KB2Q9UBS0 482 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 ATP23Q9Y6H3 246 aa13.82□□□□□ -0.2
CHCHD3-204ENST00000457942 A0A096LPI6 279 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 A8MV72 311 aaPredicted RBP13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 E7EQL1 145 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 NR5A2O00482 541 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 KLF11O14901 512 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 FRS3O43559 492 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 TLX2O43763 284 aaPredicted RBP13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 WNT11O96014 354 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 CD8AP01732 235 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 MPGP29372 298 aa13.81□□□□□ -0.2
CHCHD3-204ENST00000457942 TTKP33981 857 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms