RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 GRPRP30550 384 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 RRM2P31350 389 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 NTF4P34130 210 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 MAGEA2P43356 314 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 CLK1P49759 484 aaKnown RBP12.54□□□□□ -0.4
TIMP1-205ENST00000456754 SPIBQ01892 262 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 ST3GAL3Q11203 375 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 LAPTM4AQ15012 233 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 PDSS1Q5T2R2 415 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 RIPPLY2Q5TAB7 128 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 TTC33Q6PID6 262 aaPredicted RBP12.54□□□□□ -0.4
TIMP1-205ENST00000456754 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 AQP12AQ8IXF9 295 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 C10orf53Q8N6V4 93 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 RELL2Q8NC24 303 aaPredicted RBP12.54□□□□□ -0.4
TIMP1-205ENST00000456754 TMEM239Q8WW34 195 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 RND1Q92730 232 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 CPNE4Q96A23 557 aaPredicted RBP12.54□□□□□ -0.4
TIMP1-205ENST00000456754 DHRS1Q96LJ7 313 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 FUZQ9BT04 418 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 TMEM43Q9BTV4 400 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 TRIM15Q9C019 465 aa12.54□□□□□ -0.4
TIMP1-205ENST00000456754 MCTS1Q9ULC4 181 aaKnown RBP12.54□□□□□ -0.4
TIMP1-205ENST00000456754 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 A0A087WUU8 490 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 A0A1W2PNV4 684 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 FAM90A27PA6NNH2 459 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 M0R082 166 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 TNFSF13O75888 250 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 RCBTB2O95199 551 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 HPRP00739 348 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 H1F0P07305 194 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 MAKP20794 623 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 TIMP3P35625 211 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 IST1P53990 364 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 PER3P56645 1201 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 CSNK2A1P68400 391 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 SLC35A1P78382 337 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 H3F3AP84243 136 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 CHRNB3Q05901 458 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 TRAM2Q15035 370 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 ZNF74Q16587 644 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 OTUD3Q5T2D3 398 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 ABLIM2Q6H8Q1 611 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 TMEM211Q6ICI0 200 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 PIWIL3Q7Z3Z3 882 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 MRGPRGQ86SM5 289 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 CYP4Z1Q86W10 505 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 TUSC5Q8IXB3 177 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 NRMQ8IXM6 262 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 CNEP1R1Q8N9A8 125 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 MFSD8Q8NHS3 518 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 SLC7A13Q8TCU3 470 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 MPP4Q96JB8 637 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 ZNF587Q96SQ5 575 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 CHID1Q9BWS9 393 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 POLR2J2Q9GZM3 115 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 POLR2J3Q9H1A7 115 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 MMADHCQ9H3L0 296 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 MAGIXQ9H6Y5 334 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 FAM32AQ9Y421 112 aaKnown RBP12.53□□□□□ -0.4
TIMP1-205ENST00000456754 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 ALPK2Q86TB3 2170 aa12.53□□□□□ -0.4
TIMP1-205ENST00000456754 WIPF3A6NGB9 483 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 ZNF716A6NP11 495 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 CYTIPO60759 359 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 FKBP6O75344 327 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 STAMBPO95630 424 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 IL2RAP01589 272 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 GPIP06744 558 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 RAP2AP10114 183 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 THRBP10828 461 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 NQO1P15559 274 aaKnown RBP12.52□□□□□ -0.41
TIMP1-205ENST00000456754 BMP5P22003 454 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 GPR4P46093 362 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 MAP2K6P52564 334 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 EXOC3L2Q2M3D2 409 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 FAM98BQ52LJ0 330 aaKnown RBP12.52□□□□□ -0.41
TIMP1-205ENST00000456754 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 BTLAQ7Z6A9 289 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 YTHDF3Q7Z739 585 aaKnown RBP12.52□□□□□ -0.41
TIMP1-205ENST00000456754 TMEM179BQ7Z7N9 219 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 RSRC1Q96IZ7 334 aaKnown RBP12.52□□□□□ -0.41
TIMP1-205ENST00000456754 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 PSD2Q9BQI7 771 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 TAPBPLQ9BX59 468 aa12.52□□□□□ -0.41
TIMP1-205ENST00000456754 TIGARQ9NQ88 270 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms