RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NPR2P20594 1047 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 RPS4XP62701 263 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 TNK1Q13470 666 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 CDONQ4KMG0 1287 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 FNDC7Q5VTL7 733 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 GKN2Q86XP6 184 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 OR4M2Q8NGB6 313 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 OR4M1Q8NGD0 313 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 PELI1Q96FA3 418 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 LMF1Q96S06 567 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 PELOQ9BRX2 385 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 TPSD1Q9BZJ3 242 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC19A3Q9BZV2 496 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 PRODH2Q9UF12 536 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 HEATR5AQ86XA9 2040 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 IGHV5-51A0A0C4DH38 117 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 H0YIG0 161 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 MAGEB4O15481 346 aaPredicted RBP16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 AKR7A2O43488 359 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 ADH7P40394 386 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 INPP1P49441 399 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 GFERP55789 205 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 SERTAD2Q14140 314 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 IL20RBQ6UXL0 311 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC35F2Q8IXU6 374 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF687Q8N1G0 1237 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 TSTD1Q8NFU3 115 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 OR51L1Q8NGJ5 315 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 OR13C5Q8NGS8 318 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 OR14A16Q8NHC5 309 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CCNL2Q96S94 520 aaPredicted RBP16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CHRDQ9H2X0 955 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 TRAV1-2A0A0B4J238 106 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CD1CP29017 333 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 RPL4P36578 427 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CLDN20P56880 219 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 SNRPD2P62316 118 aaKnown RBP16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 ACTA2P62736 377 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 ACTG2P63267 376 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 LGALS3BPQ08380 585 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CDK5R1Q15078 307 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 PON3Q15166 354 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC25A35Q3KQZ1 300 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 TCTE1Q5JU00 501 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 SAMD12Q8N8I0 201 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 UPRTQ96BW1 309 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CHRNA10Q9GZZ6 450 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 LANCL2Q9NS86 450 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 NPFFR2Q9Y5X5 522 aa16.81■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF217O75362 1048 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 OR2B3O76000 313 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 CRYZL1O95825 349 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 CD1AP06126 327 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 CD27P26842 260 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 RBMS1P29558 406 aaKnown RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 NAA10P41227 235 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 BIKQ13323 160 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 CEP78Q5JTW2 689 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 DEFB119Q8N690 84 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 PTPMT1Q8WUK0 201 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 MED30Q96HR3 178 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 TGM7Q96PF1 710 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 GPX7Q96SL4 187 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 NMNAT3Q96T66 252 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 TTTY10Q9BZA0 68 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 ZCCHC4Q9H5U6 513 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 GMEB2Q9UKD1 530 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 DNAH14Q0VDD8 3507 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 A0A1W2PRG6 482 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 OR6C68A6NDL8 312 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 TLCD2A6NGC4 264 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 C17orf105B2RV13 164 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 SMLR1H3BR10 107 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 TPD52L2O43399 206 aaKnown RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 OIP5O43482 229 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 SERPINA3P01011 423 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 IGF2P01344 180 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 CD38P28907 300 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 GBX2P52951 348 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 GXYLT1Q4G148 440 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC35D3Q5M8T2 416 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 RFPL4BQ6ZWI9 263 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 MED25Q71SY5 747 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 ANGPTL6Q8NI99 470 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 ZPLD1Q8TCW7 415 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 OIT3Q8WWZ8 545 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 THAP4Q8WY91 577 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 SMIM19Q96E16 107 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 GFM1Q96RP9 751 aaKnown RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 MARVELD1Q9BSK0 173 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 PHF7Q9BWX1 381 aaPredicted RBP16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 PDE7BQ9NP56 450 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC2A4RGQ9NR83 387 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 MCUBQ9NWR8 336 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 SOHLH2Q9NX45 425 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 NCDNQ9UBB6 729 aa16.8■□□□□ 0.28
SEMA3B-209ENST00000456560 METTL12A8MUP2 240 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms