RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 PRKACAP17612 351 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 SRMP19623 302 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 U2AF2P26368 475 aaKnown RBP eCLIP2.53□□□□□ -2
R3HDM1-212ENST00000456040 CASP14P31944 242 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CASP4P49662 377 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 SGSHP51688 502 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 NDST1P52848 882 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 RGS8P57771 180 aaPredicted RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 EWSR1Q01844 656 aaKnown RBP eCLIP2.53□□□□□ -2
R3HDM1-212ENST00000456040 PAX2Q02962 417 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 ILKQ13418 452 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 KLF5Q13887 457 aaPredicted RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 TFDP1Q14186 410 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CHI3L2Q15782 390 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CHRNA6Q15825 494 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CDKN3Q16667 212 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 ACSF3Q4G176 576 aaPredicted RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 NKAIN1Q4KMZ8 207 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 FAM74A3Q4VXF1 159 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 LIPNQ5VXI9 398 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 PLCXD3Q63HM9 321 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 TMEM53Q6P2H8 277 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 DEGS2Q6QHC5 323 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 C19orf35Q6ZS72 473 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 ASRGL1Q7L266 308 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 DHDDSQ86SQ9 333 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 VPS36Q86VN1 386 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 COMTD1Q86VU5 262 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 SYCE1Q8N0S2 351 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 LINC00518Q8N0U6 118 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CLEC4FQ8N1N0 589 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CENPSQ8N2Z9 138 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CHDHQ8NE62 594 aaPredicted RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 NFAM1Q8NET5 270 aaPredicted RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 SDR9C7Q8NEX9 313 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 OR5AU1Q8NGC0 362 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 OR4D5Q8NGN0 318 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 OR4F5Q8NH21 305 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 NANPQ8TBE9 248 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 FAM3CQ92520 227 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 NUS1Q96E22 293 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 PRRC1Q96M27 445 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 ST6GALNAC5Q9BVH7 336 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 ROGDIQ9GZN7 287 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 POLR3FQ9H1D9 316 aaPredicted RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 FBXO44Q9H4M3 255 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 SLC25A19Q9HC21 320 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 IMPAD1Q9NX62 359 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 PEF1Q9UBV8 284 aaKnown RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 SLC7A8Q9UHI5 535 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 VANGL2Q9ULK5 521 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 CA5BQ9Y2D0 317 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 RHBDD3Q9Y3P4 386 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 NPTNQ9Y639 398 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 GMEB1Q9Y692 573 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 KDM5AP29375 1690 aaKnown RBP2.53□□□□□ -2
R3HDM1-212ENST00000456040 MROH1Q8NDA8 1641 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 MADDQ8WXG6 1647 aa2.53□□□□□ -2
R3HDM1-212ENST00000456040 ASXL1Q8IXJ9 1541 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 FAM135BQ49AJ0 1406 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 LRPPRCP42704 1394 aaKnown RBP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 ANKRD36BQ8N2N9 1353 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 TMEM2Q9UHN6 1383 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 IGHV3OR16-12A0A075B7B8 117 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 GABRR3A8MPY1 467 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 C12orf71A8MTZ7 269 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 C9JVG2 144 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 ZNF701M0R085 212 aaPredicted RBP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 BTN3A3O00478 584 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 IMPA2O14732 288 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 CASKO14936 926 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 EIF3HO15372 352 aaKnown RBP eCLIP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 CFLARO15519 480 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 GPAA1O43292 621 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 DUX1O43812 170 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 TSPAN2O60636 221 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 TPST2O60704 377 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 ZNF254O75437 659 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 LYPD3O95274 346 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 YEATS4O95619 227 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 TSPAN12O95859 305 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 CST1P01037 141 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 MBL2P11226 248 aaPredicted RBP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 POU2F1P14859 743 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 ETS2P15036 469 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 TNNI1P19237 187 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 PRKAR2BP31323 418 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 NAMPTP43490 491 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 ARHGDIAP52565 204 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 ATP1B3P54709 279 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 CDH6P55285 790 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 OSTNP61366 133 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 NOP14P78316 857 aaKnown RBP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 CXCL6P80162 114 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 MRPS6P82932 125 aaKnown RBP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 OTUD4Q01804 1114 aaKnown RBP2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 BNIP1Q12981 228 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 MAB21L1Q13394 359 aa2.52□□□□□ -2.01
R3HDM1-212ENST00000456040 KIAA0040Q15053 153 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms