RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 COQ5Q5HYK3 327 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 NCMAPQ5T1S8 102 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 NANOGP8Q6NSW7 305 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 ZNF704Q6ZNC4 412 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-207ENST00000453796 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 GPR32P1Q8NGA4 272 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 MFSD8Q8NHS3 518 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 PIF1Q9H611 641 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 EVA1AQ9H8M9 152 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 NANOGQ9H9S0 305 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-207ENST00000453796 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
HSPG2-207ENST00000453796 TESQ9UGI8 421 aaKnown RBP12.85□□□□□ -0.35
HSPG2-207ENST00000453796 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 SERPINB7O75635 380 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 LGI1O95970 557 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 ITGA5P08648 1049 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 MDH1P40925 334 aaKnown RBP12.84□□□□□ -0.35
HSPG2-207ENST00000453796 NRF1Q16656 503 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 DUSP7Q16829 419 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 TIMM23BQ5SRD1 257 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 FAM91A1Q658Y4 838 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 REP15Q6BDI9 236 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 CASP12Q6UXS9 341 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 CALHM3Q86XJ0 350 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 TGIF2LYQ8IUE0 185 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 ARMC8Q8IUR7 673 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 OR9K2Q8NGE7 335 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 OR10A6Q8NH74 314 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 DNAJA4Q8WW22 397 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-207ENST00000453796 SLC38A4Q969I6 547 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 KTI12Q96EK9 354 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-207ENST00000453796 ZNF385AQ96PM9 386 aaKnown RBP12.84□□□□□ -0.35
HSPG2-207ENST00000453796 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 ARHGDIGQ99819 225 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 TAPBPLQ9BX59 468 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 TRIM2Q9C040 744 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 SLC7A10Q9NS82 523 aa12.84□□□□□ -0.35
HSPG2-207ENST00000453796 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 A0A0B4J2E0 115 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 A0A1B0GX12 115 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 OR5H1A6NKK0 313 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ELOA3DA6NLF2 546 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 BBIP1A8MTZ0 92 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 M0QX08 132 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 AHSA1O95433 338 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 NPPAP01160 153 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 OPN1SWP03999 348 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 C8BP07358 591 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 HOXC12P31275 282 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 PCGF2P35227 344 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 CRYBA2P53672 197 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 RGS8P57771 180 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ADAM8P78325 824 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 FAPQ12884 760 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 CYLC2Q14093 348 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 VMACQ2NL98 169 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ELOA3BQ3SY89 546 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 RABL3Q5HYI8 236 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ALG10BQ5I7T1 473 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 TSPO2Q5TGU0 170 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ULK3Q6PHR2 472 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 C5orf46Q6UWT4 87 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 C20orf204Q6ZNR8 217 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 P2RY8Q86VZ1 359 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 SLC30A8Q8IWU4 369 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 UBE2J2Q8N2K1 259 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 SMYD1Q8NB12 490 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ELOA3Q8NG57 546 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 OR8J3Q8NGG0 315 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 OR52E4Q8NGH9 312 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 LRRC58Q96CX6 371 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 AMBRA1Q9C0C7 1298 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 PARPBPQ9NWS1 579 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ASB6Q9NWX5 421 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 TAS2R16Q9NYV7 291 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 RPS6KB2Q9UBS0 482 aa12.83□□□□□ -0.36
HSPG2-207ENST00000453796 HEATR1Q9H583 2144 aaKnown RBP12.83□□□□□ -0.36
HSPG2-207ENST00000453796 A0A087WUJ7 227 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 DPRXA6NFQ7 191 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 MRASO14807 208 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 RAD51DO75771 328 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 VAMP5O95183 116 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 PNMTP11086 282 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 GGT1P19440 569 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 CD247P20963 164 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 PPA1Q15181 289 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 MAPRE2Q15555 327 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 OR1Q1Q15612 314 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 NPTX1Q15818 432 aa12.82□□□□□ -0.36
HSPG2-207ENST00000453796 STK11Q15831 433 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms