RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CLK1P49759 484 aaKnown RBP11.68□□□□□ -0.54
VPS33A-202ENST00000451053 DIO1P49895 249 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 MAP2K6P52564 334 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 IST1P53990 364 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 CARD18P57730 90 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 DAG1Q14118 895 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 SGCBQ16585 318 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 LRRC36Q1X8D7 754 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 PDSS1Q5T2R2 415 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 C1orf140Q5VVS0 124 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 PPP4R4Q6NUP7 873 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 TMPPEQ6ZT21 453 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 SEM1Q6ZVN7 128 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 CHMP1BQ7LBR1 199 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 FJX1Q86VR8 437 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 EPHX4Q8IUS5 362 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 NKAIN4Q8IVV8 208 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 CBR4Q8N4T8 237 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 OR10G2Q8NGC3 310 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 STK35Q8TDR2 534 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 NRG4Q8WWG1 115 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 ACOT11Q8WXI4 607 aaPredicted RBP11.68□□□□□ -0.54
VPS33A-202ENST00000451053 DNAJC9Q8WXX5 260 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 DMRTA2Q96SC8 542 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 MAN2C1Q9NTJ4 1040 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 PDP1Q9P0J1 537 aaPredicted RBP11.68□□□□□ -0.54
VPS33A-202ENST00000451053 MEMO1Q9Y316 297 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF462Q96JM2 2506 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 TRBV4-1A0A0J9YWV2 114 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 SH3PXD2BA1X283 911 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 HTR3EA5X5Y0 456 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 E9PLN8 166 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 SULT2B1O00204 365 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 LRRTM2O43300 516 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 TGM6O95932 706 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 HOXD4P09016 255 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ANXA8P13928 327 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 KLK2P20151 261 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 PTGER4P35408 488 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 IDUAP35475 653 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 HSPA13P48723 471 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ALDH3A2P51648 485 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 NUP107P57740 925 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 PON3Q15166 354 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF239Q16600 458 aaKnown RBP11.67□□□□□ -0.54
VPS33A-202ENST00000451053 RFX4Q33E94 735 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 OTUD3Q5T2D3 398 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-202ENST00000451053 NSUN5P2Q63ZY6 315 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 B3GNT6Q6ZMB0 384 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF730Q6ZMV8 503 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 RNF113BQ8IZP6 322 aaKnown RBP11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ATG16L2Q8NAA4 619 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 SLC7A13Q8TCU3 470 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 TMEM255BQ8WV15 326 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 KTI12Q96EK9 354 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-202ENST00000451053 RDH12Q96NR8 316 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 UCN2Q96RP3 112 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 VKORC1Q9BQB6 163 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 TTYH2Q9BSA4 534 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 FUZQ9BT04 418 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 TMEM43Q9BTV4 400 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF426Q9BUY5 554 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 PTDSS2Q9BVG9 487 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 POTEKPQ9BYX7 375 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 CALHM2Q9HA72 323 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF556Q9HAH1 456 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 USE1Q9NZ43 259 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 ENOPH1Q9UHY7 261 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 HDGFL3Q9Y3E1 203 aa11.67□□□□□ -0.54
VPS33A-202ENST00000451053 IGHV3-15A0A0B4J1V0 119 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 CD8B2A6NJW9 211 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 LIPT2A6NK58 231 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 SLC22A20A6NK97 555 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PDLIM1O00151 329 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 SOCS2O14508 198 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 EI24O14681 340 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PIP5K1CO60331 668 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 OR10H3O60404 316 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 AQP8O94778 261 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TOXO94900 526 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 AHSA1O95433 338 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 SYNGR4O95473 234 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PMS2P2O95744 297 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 GLI4P10075 376 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 CDH2P19022 906 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 RPS5P46782 204 aaKnown RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 RAD23AP54725 363 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 UGT2B15P54855 530 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 OR2B6P58173 313 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 RAC3P60763 192 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 CSNK2A1P68400 391 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PPP2R2BQ00005 443 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PPP1R8Q12972 351 aaKnown RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 SF3B4Q15427 424 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PODNL1Q6PEZ8 512 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TTC33Q6PID6 262 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms