RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 FAPQ12884 760 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 OR7A5Q15622 319 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 ADRM1Q16186 407 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 ZNF672Q499Z4 452 aaPredicted RBP17.07■□□□□ 0.32
USP40-207ENST00000450940 C1QTNF12Q5T7M4 302 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 OR7E24Q6IFN5 339 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 DHRS4L2Q6PKH6 230 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 C6orf89Q6UWU4 347 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 CASP12Q6UXS9 341 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 YTHDF3Q7Z739 585 aaKnown RBP17.07■□□□□ 0.32
USP40-207ENST00000450940 DPP10Q8N608 796 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 LSMEM1Q8N8F7 131 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 OR9K2Q8NGE7 335 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 NFKBIDQ8NI38 313 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 FBXW5Q969U6 566 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 TRIM2Q9C040 744 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 CXorf56Q9H5V9 222 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 C12orf10Q9HB07 376 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 SLC7A10Q9NS82 523 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 NPAP1Q9NZP6 1156 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 DCTN4Q9UJW0 460 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 SLC25A15Q9Y619 301 aa17.07■□□□□ 0.32
USP40-207ENST00000450940 PLCE1Q9P212 2302 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 CIB4A0PJX0 185 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 FTCDNL1E5RQL4 147 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 CLOCKO15516 846 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 RAD51DO75771 328 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 SASH3O75995 380 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 VAMP5O95183 116 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 EGR4Q05215 589 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 RUNDC3AQ59EK9 446 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 KRT73Q86Y46 540 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 OR52E4Q8NGH9 312 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 MFSD8Q8NHS3 518 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 TSPEARQ8WU66 669 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 NEUROG1Q92886 237 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 BOD1Q96IK1 185 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 COX4I2Q96KJ9 171 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 CPPED1Q9BRF8 314 aaPredicted RBP17.06■□□□□ 0.32
USP40-207ENST00000450940 SIKE1Q9BRV8 207 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 SPATA5L1Q9BVQ7 753 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 TAPBPLQ9BX59 468 aa17.06■□□□□ 0.32
USP40-207ENST00000450940 NSD1Q96L73 2696 aaPredicted RBP17.06■□□□□ 0.32
USP40-207ENST00000450940 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 CCT8L1PA6NM43 557 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 EVPLLA8MZ36 301 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 SHISA9B4DS77 424 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 TPST1O60507 370 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 RPS4XP62701 263 aaKnown RBP17.05■□□□□ 0.32
USP40-207ENST00000450940 HOXC5Q00444 222 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 TSPO2Q5TGU0 170 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 METTL21CQ5VZV1 264 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 C1orf162Q8NEQ5 155 aaPredicted RBP17.05■□□□□ 0.32
USP40-207ENST00000450940 KBTBD8Q8NFY9 601 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 SMAP2Q8WU79 429 aaPredicted RBP17.05■□□□□ 0.32
USP40-207ENST00000450940 Q96MF0 132 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 ZNF385AQ96PM9 386 aaKnown RBP17.05■□□□□ 0.32
USP40-207ENST00000450940 BDH2Q9BUT1 245 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 PTDSS2Q9BVG9 487 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 GRIP2Q9C0E4 1043 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 LEF1Q9UJU2 399 aaPredicted RBP17.05■□□□□ 0.32
USP40-207ENST00000450940 TRIM33Q9UPN9 1127 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 LAMP3Q9UQV4 416 aa17.05■□□□□ 0.32
USP40-207ENST00000450940 HEATR1Q9H583 2144 aaKnown RBP17.05■□□□□ 0.32
USP40-207ENST00000450940 SOD3P08294 240 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 SCARB2Q14108 478 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 PGGHGQ32M88 737 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 KRTAP21-3Q3LHN1 58 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 TMEM225Q6GV28 225 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 CREB3L2Q70SY1 520 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 AAED1Q7RTV5 226 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 C17orf78Q8N4C9 275 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 WDR31Q8NA23 367 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 POMGNT2Q8NAT1 580 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 THOC1Q96FV9 657 aaKnown RBP17.04■□□□□ 0.32
USP40-207ENST00000450940 POM121Q96HA1 1249 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 RADILQ96JH8 1075 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 SMR3AQ99954 134 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 ADPRHL2Q9NX46 363 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 UPB1Q9UBR1 384 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.04■□□□□ 0.32
USP40-207ENST00000450940 RASD1Q9Y272 281 aa17.04■□□□□ 0.32
USP40-207ENST00000450940 PRORSD1PA6NEY8 169 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 AHSA1O95433 338 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 SLC6A2P23975 617 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 PTAFRP25105 342 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 HTR2AP28223 471 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 MPGP29372 298 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 C5orf46Q6UWT4 87 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 TMEM108Q6UXF1 575 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 RETREG3Q86VR2 466 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 PTOV1Q86YD1 416 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 EPHX4Q8IUS5 362 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 CIARTQ8N365 385 aaPredicted RBP17.03■□□□□ 0.32
USP40-207ENST00000450940 HIPK4Q8NE63 616 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 BHLHE22Q8NFJ8 381 aaPredicted RBP17.03■□□□□ 0.32
USP40-207ENST00000450940 OR52N5Q8NH56 324 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 DNAJA4Q8WW22 397 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms