RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MOSPD2Q8NHP6 518 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 HIST1H2ACQ93077 130 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PTP4A1Q93096 173 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 MRGPRX4Q96LA9 322 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PTDSS2Q9BVG9 487 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 FGF20Q9NP95 211 aaPredicted RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 IL17BQ9UHF5 180 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 VDAC3Q9Y277 283 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 IER3IP1Q9Y5U9 82 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 ZNF208O43345 1280 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 CCL3P10147 92 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 APEHP13798 732 aaKnown RBP12.91□□□□□ -0.34
USP39-207ENST00000450066 GSTT1P30711 240 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 AQP2P41181 271 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 PLPPR5Q32ZL2 321 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 GXYLT1Q4G148 440 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 ACER2Q5QJU3 275 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 PRAMEF20Q5VT98 475 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 C1QL3Q5VWW1 255 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 NIPAL3Q6P499 406 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 MAMDC2Q7Z304 686 aaPredicted RBP12.91□□□□□ -0.34
USP39-207ENST00000450066 NANOGNBQ7Z5D8 188 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 GALNT15Q8N3T1 639 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 SIRT6Q8N6T7 355 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 RAB2BQ8WUD1 216 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 PSMF1Q92530 271 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 OTULINQ96BN8 352 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 C12orf43Q96C57 262 aaKnown RBP12.91□□□□□ -0.34
USP39-207ENST00000450066 NDEL1Q9GZM8 345 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 NAA50Q9GZZ1 169 aaKnown RBP12.91□□□□□ -0.34
USP39-207ENST00000450066 PTGES2Q9H7Z7 377 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 TAS2R16Q9NYV7 291 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 KLHL21Q9UJP4 597 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 ERGIC3Q9Y282 383 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 ADAM18Q9Y3Q7 739 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 MPDZO75970 2070 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
USP39-207ENST00000450066 H3BMQ9 156 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 OR2T1O43869 369 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 PAICSP22234 425 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 FOXF1Q12946 379 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 INPP5JQ15735 1006 aaPredicted RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 TIGD6Q17RP2 521 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 ALG10Q5BKT4 473 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 IGF2-ASQ6U949 168 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 MEPCEQ7L2J0 689 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 ZNF367Q7RTV3 350 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 ANKRD13BQ86YJ7 626 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 PLCZ1Q86YW0 608 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 LRRC75AQ8NAA5 344 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 OR4K17Q8NGC6 315 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 OR6S1Q8NH40 331 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 YIPF6Q96EC8 236 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 C1GALT1C1Q96EU7 318 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 COG8Q96MW5 612 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 NPAS1Q99742 590 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 KATNB1Q9BVA0 655 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 HCAR1Q9BXC0 346 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 PTTG2Q9NZH5 202 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 FBXL2Q9UKC9 423 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 SLC6A5Q9Y345 797 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 AHSA1O95433 338 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 CD14P08571 375 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 HIST1H1CP16403 213 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 NOVA1P51513 510 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 RPL18Q07020 188 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 TMED1Q13445 227 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 CRMP1Q14194 572 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 DCAF10Q5QP82 559 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 ARMC4Q5T2S8 1044 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 ZNF468Q5VIY5 522 aaPredicted RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 B3GNTL1Q67FW5 361 aaPredicted RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 OR52E2Q8NGJ4 325 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 ADAMTS14Q8WXS8 1223 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 KIAA1143Q96AT1 154 aaPredicted RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 THOC3Q96J01 351 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 MND1Q9BWT6 205 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 MED20Q9H944 212 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 GPN2Q9H9Y4 310 aaPredicted RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 PROK2Q9HC23 129 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 ASCL3Q9NQ33 180 aa12.9□□□□□ -0.34
USP39-207ENST00000450066 EXOGQ9Y2C4 368 aaKnown RBP12.9□□□□□ -0.34
USP39-207ENST00000450066 SLC22A31A6NKX4 558 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 FAM47E-STBD1D6RA91 191 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 IMPA2O14732 288 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 SNX4O95219 450 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 ERVK-25P63136 954 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 SGCBQ16585 318 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 ASCL5Q7RTU5 278 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 GPALPP1Q8IXQ4 340 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 NANOGP1Q8N7R0 232 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 FAM98AQ8NCA5 519 aaKnown RBP12.89□□□□□ -0.35
USP39-207ENST00000450066 OR4K13Q8NH42 304 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms