RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ST3GAL2Q16842 350 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 RFX4Q33E94 735 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 RPUSD3Q6P087 351 aaKnown RBP13.16□□□□□ -0.3
TNF-208ENST00000449264 FAM180AQ6UWF9 173 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 KIF18BQ86Y91 864 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 TEX19Q8NA77 164 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 Q8NA96 180 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 NEIL3Q8TAT5 605 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 CYGBQ8WWM9 190 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 MBOAT4Q96T53 435 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 TAPBPLQ9BX59 468 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 POTEKPQ9BYX7 375 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 FKRPQ9H9S5 495 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 SEC14L4Q9UDX3 406 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 IL20RAQ9UHF4 553 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 AP4B1Q9Y6B7 739 aa13.16□□□□□ -0.3
TNF-208ENST00000449264 LINC01387J3KSC0 135 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 MT-ATP6P00846 226 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 OSMP13725 252 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 BMP7P18075 431 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 FKBP2P26885 142 aaKnown RBP13.15□□□□□ -0.3
TNF-208ENST00000449264 EPHA2P29317 976 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 GRPRP30550 384 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
TNF-208ENST00000449264 DIO1P49895 249 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 OR2B6P58173 313 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 SRYQ05066 204 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 COX10Q12887 443 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 LY6DQ14210 128 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 CD300LDQ6UXZ3 194 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 ZNF620Q6ZNG0 422 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 Q6ZPB1 254 aaPredicted RBP13.15□□□□□ -0.3
TNF-208ENST00000449264 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 MAMDC2Q7Z304 686 aaPredicted RBP13.15□□□□□ -0.3
TNF-208ENST00000449264 GGNQ86UU5 652 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 PARP8Q8N3A8 854 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 ABTB1Q969K4 478 aaPredicted RBP13.15□□□□□ -0.3
TNF-208ENST00000449264 RDH12Q96NR8 316 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 ADI1Q9BV57 179 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 PLA2G12AQ9BZM1 189 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 TBC1D23Q9NUY8 699 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 REV1Q9UBZ9 1251 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 ENOPH1Q9UHY7 261 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 ZNF229Q9UJW7 825 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 HDGFL3Q9Y3E1 203 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 CDH10Q9Y6N8 788 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 EPG5Q9HCE0 2579 aa13.15□□□□□ -0.3
TNF-208ENST00000449264 A0A0J9YW62 118 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 HTR3EA5X5Y0 456 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 LIPT2A6NK58 231 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 FTCDNL1E5RQL4 147 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 BLOC1S5-TXNDC5H3BN57 136 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 M0R082 166 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 SULT2B1O00204 365 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 HCN1O60741 890 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.31
TNF-208ENST00000449264 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.31
TNF-208ENST00000449264 HIST1H2ABP04908 130 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 ASAH2BP0C7U1 165 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 SLC9A3P48764 834 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.31
TNF-208ENST00000449264 LHX2P50458 406 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 HSF1Q00613 529 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 NPRL3Q12980 569 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 C3AR1Q16581 482 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 CLEC12AQ5QGZ9 265 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 C6orf52Q5T4I8 152 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 HIST3H2AQ7L7L0 130 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 SIAH3Q8IW03 269 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 MFSD8Q8NHS3 518 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 ZNF417Q8TAU3 575 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 TEX47Q8TBZ9 253 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 HIST1H2ACQ93077 130 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 TNFRSF13CQ96RJ3 184 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 ZNF587Q96SQ5 575 aaPredicted RBP13.15□□□□□ -0.31
TNF-208ENST00000449264 ASPNQ9BXN1 380 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 OR52D1Q9H346 318 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 ALKBH4Q9NXW9 302 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 SIGLEC7Q9Y286 467 aa13.15□□□□□ -0.31
TNF-208ENST00000449264 H0YJX3 145 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 WISP2O76076 250 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 IGHG3P01860 377 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 EIF1AXP47813 144 aaKnown RBP13.14□□□□□ -0.31
TNF-208ENST00000449264 HSPA13P48723 471 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 SUCLG1P53597 346 aaKnown RBP13.14□□□□□ -0.31
TNF-208ENST00000449264 CTU2Q2VPK5 515 aaKnown RBP13.14□□□□□ -0.31
TNF-208ENST00000449264 ZBED5Q49AG3 693 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 HBMQ6B0K9 141 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 TMPPEQ6ZT21 453 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 ESPNLQ6ZVH7 1005 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 DHRSXQ8N5I4 330 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 CISD2Q8N5K1 135 aaKnown RBP13.14□□□□□ -0.31
TNF-208ENST00000449264 IQCF1Q8N6M8 205 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 OR8D4Q8NGM9 314 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms