RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 KTI12Q96EK9 354 aaPredicted RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 SGTBQ96EQ0 304 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 FYTTD1Q96QD9 318 aaKnown RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 NPAS1Q99742 590 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 FKRPQ9H9S5 495 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 SRA1Q9HD15 236 aaKnown RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 PAQR5Q9NXK6 330 aaPredicted RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 FBXL21Q9UKT6 434 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 MRPS7Q9Y2R9 242 aaKnown RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 NCOR1O75376 2440 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 CENPXA8MT69 81 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 SRP9P49458 86 aaKnown RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 NR0B1P51843 470 aaKnown RBP13.53□□□□□ -0.24
SF1-211ENST00000448404 SLC37A1P57057 533 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 FUT7Q11130 342 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 GPR50Q13585 617 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 PRR23CQ6ZRP0 262 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 SLC35F3Q8IY50 421 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 SLC38A6Q8IZM9 456 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 ABHD4Q8TB40 342 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 CITED4Q96RK1 184 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 NUDT9Q9BW91 350 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 SLC25A18Q9H1K4 315 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 NLKQ9UBE8 527 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 TMEM131Q92545 1883 aa13.53□□□□□ -0.24
SF1-211ENST00000448404 GPR179Q6PRD1 2367 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 ZNF749O43361 778 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 RGS9O75916 674 aaPredicted RBP13.52□□□□□ -0.24
SF1-211ENST00000448404 NUDT14O95848 222 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 PSKH1P11801 424 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 ITPKBP27987 946 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 SLC6A6P31641 620 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 HTR3AP46098 478 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.24
SF1-211ENST00000448404 ARL4DP49703 201 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 GALK2Q01415 458 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 EGR4Q05215 589 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 PIGKQ92643 395 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 PELI1Q96FA3 418 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 PGLYRP3Q96LB9 341 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 WDFY2Q96P53 400 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 OR14A2Q96R54 314 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 GFM1Q96RP9 751 aaKnown RBP13.52□□□□□ -0.24
SF1-211ENST00000448404 NDC1Q9BTX1 674 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 EXTL2Q9UBQ6 330 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 GMEB2Q9UKD1 530 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 KLHDC2Q9Y2U9 406 aa13.52□□□□□ -0.24
SF1-211ENST00000448404 CACNA1EQ15878 2313 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 IRGMA1A4Y4 181 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 SLC22A31A6NKX4 558 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 C11orf98E9PRG8 122 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 FMO6PO60774 539 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 AK1P00568 194 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 MT-ND5P03915 603 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 SNRPBP14678 240 aaKnown RBP13.52□□□□□ -0.25
SF1-211ENST00000448404 GNG2P59768 71 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 CDK10Q15131 360 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 NSDHLQ15738 373 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 ZNF141Q15928 474 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 ACSM3Q53FZ2 586 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 Q7L0L9 218 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 KDM8Q8N371 416 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 TOR1AIP2Q8NFQ8 470 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 CHAC2Q8WUX2 184 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 HOXB13Q92826 284 aaPredicted RBP13.52□□□□□ -0.25
SF1-211ENST00000448404 PMEPA1Q969W9 287 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 MKKSQ9NPJ1 570 aaPredicted RBP13.52□□□□□ -0.25
SF1-211ENST00000448404 PRDM6Q9NQX0 595 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 TRAPPC4Q9Y296 219 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 SLC6A5Q9Y345 797 aa13.52□□□□□ -0.25
SF1-211ENST00000448404 AK6Q9Y3D8 172 aaKnown RBP13.52□□□□□ -0.25
SF1-211ENST00000448404 A0A087WUJ7 227 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 MEIOCA2RUB1 952 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 TLCD2A6NGC4 264 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 ACOD1A6NK06 481 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 ELOA3DA6NLF2 546 aaPredicted RBP13.51□□□□□ -0.25
SF1-211ENST00000448404 HCRTR2O43614 444 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 NDUFB2O95178 105 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 UTS2O95399 124 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 CLDN12P56749 244 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 SCN1BQ07699 218 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 ELOA3BQ3SY89 546 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 LEG1Q6P5S2 330 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 LINC00114Q6XXX2 140 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 IQCF2Q8IXL9 164 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 LSMEM1Q8N8F7 131 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 NPEPL1Q8NDH3 523 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 ELOA3Q8NG57 546 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 OR4M1Q8NGD0 313 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 OR6C4Q8NGE1 309 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 SLC2A12Q8TD20 617 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 MKL2Q9ULH7 1088 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 LOC105371267A0A1B0GV96 52 aa13.51□□□□□ -0.25
SF1-211ENST00000448404 DOK2O60496 412 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms