RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CRATP43155 626 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 TGFBR3Q03167 851 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 GSTA3Q16772 222 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 GTDC1Q4AE62 458 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 LIN52Q52LA3 116 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 RPS26P11Q5JNZ5 115 aaPredicted RBP24.75■■□□□ 1.55
CBX4-202ENST00000448310 ZNF544Q6NX49 715 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 GLB1L3Q8NCI6 653 aaPredicted RBP24.75■■□□□ 1.55
CBX4-202ENST00000448310 THAP1Q9NVV9 213 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 ADPRHL2Q9NX46 363 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 DSPPQ9NZW4 1301 aa24.75■■□□□ 1.55
CBX4-202ENST00000448310 AQP7P3A6NL99 342 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 A8MV72 311 aaPredicted RBP24.74■■□□□ 1.55
CBX4-202ENST00000448310 ATP6V1G2-DDX39BF2Z307 99 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 SNNO75324 88 aaPredicted RBP24.74■■□□□ 1.55
CBX4-202ENST00000448310 PRG2P13727 222 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 HIKESHIQ53FT3 197 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 CLIP4Q8N3C7 705 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 SPATA3Q8NHX4 192 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 AURKBQ96GD4 344 aaPredicted RBP24.74■■□□□ 1.55
CBX4-202ENST00000448310 MANSC1Q9H8J5 431 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 FKRPQ9H9S5 495 aa24.74■■□□□ 1.55
CBX4-202ENST00000448310 ZNF443Q9Y2A4 671 aaPredicted RBP24.74■■□□□ 1.55
CBX4-202ENST00000448310 TMEM120BA0PK00 339 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 H7C417 338 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 KLF11O14901 512 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 SLC22A3O75751 556 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 IL6P05231 212 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 DSCR9P59020 149 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 PRPS1P60891 318 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 LGALS3BPQ08380 585 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 TMEM249Q2WGJ8 235 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 PDCD4Q53EL6 469 aaKnown RBP24.73■■□□□ 1.55
CBX4-202ENST00000448310 WBP2NLQ6ICG8 309 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 SLC38A5Q8WUX1 472 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 SF3B5Q9BWJ5 86 aaKnown RBP24.73■■□□□ 1.55
CBX4-202ENST00000448310 RAB21Q9UL25 225 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 MOKQ9UQ07 419 aa24.73■■□□□ 1.55
CBX4-202ENST00000448310 STAB1Q9NY15 2570 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 LY6HO94772 140 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 ANP32DO95626 131 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 TFPTP0C1Z6 253 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 IDO1P14902 403 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 CRISP3P54108 245 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 DSTNP60981 165 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 COPZ1P61923 177 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 SLC9B1Q4ZJI4 515 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 C6orf52Q5T4I8 152 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 KLHL24Q6TFL4 600 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 POMGNT2Q8NAT1 580 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 TNFRSF13CQ96RJ3 184 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 TAPBPLQ9BX59 468 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 TPT1P8Q9HAU6 139 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 CHST2Q9Y4C5 530 aa24.72■■□□□ 1.55
CBX4-202ENST00000448310 ELOA3DA6NLF2 546 aaPredicted RBP24.71■■□□□ 1.55
CBX4-202ENST00000448310 FRS3O43559 492 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 APOBEC3AP31941 199 aaPredicted RBP24.71■■□□□ 1.55
CBX4-202ENST00000448310 P2RY4P51582 365 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 ELOA3BQ3SY89 546 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 TMEM225Q6GV28 225 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 MAVSQ7Z434 540 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 ELOA3Q8NG57 546 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 NANOS1Q8WY41 292 aaKnown RBP24.71■■□□□ 1.55
CBX4-202ENST00000448310 FAM168AQ92567 244 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 VPS33AQ96AX1 596 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 TMEM19Q96HH6 336 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 CALML5Q9NZT1 146 aa24.71■■□□□ 1.55
CBX4-202ENST00000448310 A8MVM7 634 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 KRT33AO76009 404 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 WNT11O96014 354 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 NCF2P19878 526 aaPredicted RBP24.7■■□□□ 1.54
CBX4-202ENST00000448310 SELENOPP49908 381 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 LOXL1Q08397 574 aaPredicted RBP24.7■■□□□ 1.54
CBX4-202ENST00000448310 CHRFAM7AQ494W8 412 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 RNF220Q5VTB9 566 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 C1orf140Q5VVS0 124 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 SERPINA11Q86U17 422 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 OR9I1Q8NGQ6 314 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 FBXO17Q96EF6 278 aa24.7■■□□□ 1.54
CBX4-202ENST00000448310 MAELQ96JY0 434 aaKnown RBP24.7■■□□□ 1.54
CBX4-202ENST00000448310 LGI1O95970 557 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 ZCCHC18P0CG32 403 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 CHRNB3Q05901 458 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 LARS2Q15031 903 aaKnown RBP24.69■■□□□ 1.54
CBX4-202ENST00000448310 PODNL1Q6PEZ8 512 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 C10orf105Q8TEF2 133 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 C3orf49Q96BT1 292 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 ALKBH3Q96Q83 286 aaPredicted RBP24.69■■□□□ 1.54
CBX4-202ENST00000448310 OR52B2Q96RD2 323 aa24.69■■□□□ 1.54
CBX4-202ENST00000448310 REPIN1Q9BWE0 567 aaKnown RBP24.69■■□□□ 1.54
CBX4-202ENST00000448310 IGHV1-18A0A0C4DH31 117 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 SLC25A16P16260 332 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 EFNA4P52798 201 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 HOXC5Q00444 222 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 TBRG1Q3YBR2 411 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 C6orf10Q5SRN2 563 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 PRAMEF8Q5VWM4 474 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 PRAMEF7Q5VXH5 474 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 ATG16L1Q676U5 607 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 CREB3L2Q70SY1 520 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms