RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 B8ZZF3 427 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 OR7A10O76100 309 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 PMS2P2O95744 297 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 GRPRP30550 384 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 OMPP47874 163 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 CTBP2P56545 445 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 RPS3AP61247 264 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 TLE1Q04724 770 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 SGCBQ16585 318 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF74Q16587 644 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 FAM69AQ5T7M9 428 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF770Q6IQ21 691 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 PGBD2Q6P3X8 592 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 SHQ1Q6PI26 577 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZER1Q7Z7L7 766 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 PM20D2Q8IYS1 436 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 ST6GALNAC3Q8NDV1 305 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 MFSD8Q8NHS3 518 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 TAPBPLQ9BX59 468 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 DCLRE1BQ9H816 532 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 SEC14L4Q9UDX3 406 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 OAZ3Q9UMX2 235 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 POLEQ07864 2286 aa16.12■□□□□ 0.17
TRAPPC4-203ENST00000447216 CLCA1A8K7I4 914 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF814B7Z6K7 855 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 PDLIM1O00151 329 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 OR2T1O43869 369 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 MGRN1O60291 552 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 AKR7A3O95154 331 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 POU2F1P14859 743 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 CSNK2A1P68400 391 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 SLC35A1P78382 337 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 RBPJQ06330 500 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 C3P1Q6ZMU1 363 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 CHMP1BQ7LBR1 199 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 EPHX4Q8IUS5 362 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 AQP11Q8NBQ7 271 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 ROBO4Q8WZ75 1007 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 UCN2Q96RP3 112 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 C6orf203Q9P0P8 240 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 TRAPPC4Q9Y296 219 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 TMEM5Q9Y2B1 443 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF835Q9Y2P0 537 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 ALPK2Q86TB3 2170 aa16.11■□□□□ 0.17
TRAPPC4-203ENST00000447216 EIF4E1BA6NMX2 242 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 EFCAB9A8MZ26 197 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 M0R082 166 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 CDC42EP2O14613 210 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 SLC19A2O60779 497 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 GASTP01350 101 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 SAGP10523 405 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 GTF2E2P29084 291 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 RAC3P60763 192 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 MRPL49Q13405 166 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 GK3PQ14409 553 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 IGFBP7Q16270 282 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF239Q16600 458 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 OTUD3Q5T2D3 398 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 STK32CQ86UX6 486 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 HIPK1Q86Z02 1210 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 CDK20Q8IZL9 346 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 LINC00471Q8N535 108 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 TMEM99Q8N816 258 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 OR13C2Q8NGS9 318 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 OR6S1Q8NH40 331 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF417Q8TAU3 575 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 GNPDA2Q8TDQ7 276 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 GTPBP3Q969Y2 492 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 NRBF2Q96F24 287 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 TRIB1Q96RU8 372 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF587Q96SQ5 575 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 FEVQ99581 238 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 CIB1Q99828 191 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 FKRPQ9H9S5 495 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 SMURF2Q9HAU4 748 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 RNPEPL1Q9HAU8 725 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 NANSQ9NR45 359 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 STX18Q9P2W9 335 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 SH3BGRL2Q9UJC5 107 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 TINAGQ9UJW2 476 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 PCNX1Q96RV3 2341 aa16.1■□□□□ 0.17
TRAPPC4-203ENST00000447216 SMG1Q96Q15 3661 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 INTS1Q8N201 2190 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 G3V2T6 193 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 PRRG2O14669 202 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 KLF4O43474 513 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 RAMP1O60894 148 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 SYNGR4O95473 234 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 MT-ATP6P00846 226 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 IGF2P01344 180 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 ENPP1P22413 925 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 IFNGR2P38484 337 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 GSSP48637 474 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 ARHGDIAP52565 204 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 PON3Q15166 354 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 ACSF3Q4G176 576 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 C1orf94Q6P1W5 598 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 TMPRSS11FQ6ZWK6 438 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 MAMDC2Q7Z304 686 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 DOLPP1Q86YN1 238 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms