RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CDCP1Q9H5V8 836 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 TMEM185BQ9H7F4 350 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GIMAP2Q9UG22 337 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CCL26Q9Y258 94 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ETV7Q9Y603 341 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 A0A087WV62 115 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SPINT2O43291 252 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GABRA2P47869 451 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 UCNP55089 124 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CLDN17P56750 224 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CSNK1G2P78368 415 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ABHD17CQ6PCB6 329 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SHISA6Q6ZSJ9 500 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 DUSP19Q8WTR2 217 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ISOC1Q96CN7 298 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 MRGPRX1Q96LB2 322 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SAP130Q9H0E3 1048 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CLEC1BQ9P126 229 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 LOXL2Q9Y4K0 774 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 LRP5O75197 1615 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 PVRP15151 417 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 BMI1P35226 326 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SOX3P41225 446 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 EXOSC7Q15024 291 aaKnown RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 H1FNTQ75WM6 255 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 MAML2Q8IZL2 1156 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ARFGAP1Q8N6T3 406 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 POGLUT1Q8NBL1 392 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 LSM14AQ8ND56 463 aaKnown RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 PIGCQ92535 297 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ABCG5Q9H222 651 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 PROCRQ9UNN8 238 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 NUBP2Q9Y5Y2 271 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 FAM230AA0A1W2PPH8 454 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 GAPDHSO14556 408 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CTXN2P0C2S0 81 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 MAGEA3P43357 314 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 MFAP5Q13361 173 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 PIN1Q13526 163 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 DUSP7Q16829 419 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 TMEM31Q5JXX7 168 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 FRMPD2BQ6IN97 320 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 FANCGO15287 622 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 RPS5P46782 204 aaKnown RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 NPSR1Q6W5P4 371 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 VTCN1Q7Z7D3 282 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SLC15A4Q8N697 577 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 KCNG3Q8TAE7 436 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 FNDC9Q8TBE3 224 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 NANPQ8TBE9 248 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 BARHL1Q9BZE3 327 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 TRAV17A0A0B4J275 112 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 MYOCOSA0A1B0GUC4 107 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 TMEM127O75204 238 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 NFYAP23511 347 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ERVK-25P63136 954 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 MLLT11Q13015 90 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 UBE2NLQ5JXB2 153 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ST7LQ8TDW4 575 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CITED4Q96RK1 184 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 PHOX2BQ99453 314 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 SYT11Q9BT88 431 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 CFHR5Q9BXR6 569 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 RGCCQ9H4X1 137 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 EGLN3Q9H6Z9 239 aa7.93□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 USP36Q9P275 1121 aaKnown RBP7.93□□□□□ -1.14
PTPN3-204ENST00000446349 RAB3DO95716 219 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 CAPZBP47756 277 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 RPS26P11Q5JNZ5 115 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-204ENST00000446349 VASNQ6EMK4 673 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 LINC00696Q6ZRV3 163 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 ERVK13-1Q9NX77 482 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 ATAD5Q96QE3 1844 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF254O75437 659 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 DCNP07585 359 aaKnown RBP7.92□□□□□ -1.14
PTPN3-204ENST00000446349 MSR1P21757 451 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 WNT7BP56706 349 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 IER5LQ5T953 404 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 LRRC28Q86X40 367 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-204ENST00000446349 SERPINA12Q8IW75 414 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 C17orf50Q8WW18 174 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 LIN7BQ9HAP6 207 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 NME4O00746 187 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 CD14P08571 375 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 ZDHHC11BP0C7U3 371 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 BDKRB2P30411 391 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 DNASE1L3Q13609 305 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 JMJD6Q6NYC1 403 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-204ENST00000446349 MED25Q71SY5 747 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 NDUFAF7Q7L592 441 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 BAHD1Q8TBE0 780 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-204ENST00000446349 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-204ENST00000446349 C17orf112F2Z3M2 114 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 PAHP00439 452 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 ADH4P08319 380 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 LSSP48449 732 aa7.92□□□□□ -1.14
PTPN3-204ENST00000446349 HBA1P69905 142 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms