RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FKBP1BP68106 108 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 IL10RAQ13651 578 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 FRRS1Q6ZNA5 592 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 PCSK9Q8NBP7 692 aaKnown RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 OR56A1Q8NGH5 318 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 OR51S1Q8NGJ8 323 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 TFGQ92734 400 aaPredicted RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 BPIFA2Q96DR5 249 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 LMLNQ96KR4 655 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 KRCC1Q9NPI7 259 aaPredicted RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 ASF1BQ9NVP2 202 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 OR6C68A6NDL8 312 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 ACOT7O00154 380 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 ZNF3P17036 446 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 SLC2A5P22732 501 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 CERS1P27544 350 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 GPR1P46091 355 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 RBMS2Q15434 407 aaKnown RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 MANEAQ5SRI9 462 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 TMEM215Q68D42 235 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 OR52E2Q8NGJ4 325 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 MS4A4EQ96PG1 132 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 NKX3-1Q99801 234 aaPredicted RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
VPS52-212ENST00000445902 SLC19A3Q9BZV2 496 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 XKR8Q9H6D3 395 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 SLC35A3Q9Y2D2 325 aa12.84□□□□□ -0.35
VPS52-212ENST00000445902 DOCK9Q9BZ29 2069 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 TRAV14DV4A0A0A6YYC5 116 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ZNF879B4DU55 563 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 OGG1O15527 345 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 EMC8O43402 210 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ADCYAP1P18509 176 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 MPIP34949 423 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ZNF136P52737 540 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 EPHB3P54753 998 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 SLC16A13Q7RTY0 426 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 NR4A3Q92570 626 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 CRB3Q9BUF7 120 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 C2orf42Q9NWW7 574 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ZNF223Q9UK11 482 aaPredicted RBP12.83□□□□□ -0.36
VPS52-212ENST00000445902 WDR45Q9Y484 360 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 V9GY05 133 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 A0A1B0GW55 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 A0A1W2PRU2 124 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 TMEM200CA6NKL6 621 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 GNB5O14775 395 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ABLIM3O94929 683 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 RPP14O95059 124 aaKnown RBP12.83□□□□□ -0.36
VPS52-212ENST00000445902 AKR7A3O95154 331 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4L2P0CJ85 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4L3P0CJ86 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4L4P0CJ87 422 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4L5P0CJ88 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4L6P0CJ89 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4L7P0CJ90 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 RPA2P15927 270 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 CBR1P16152 277 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ZNF528Q3MIS6 628 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 OR2W3Q7Z3T1 314 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 TMED4Q7Z7H5 227 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 EXO5Q9H790 373 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 BIN3Q9NQY0 253 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 DUX4Q9UBX2 424 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 SIGLEC7Q9Y286 467 aa12.83□□□□□ -0.36
VPS52-212ENST00000445902 A0A1B0GVT2 93 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 LRIT2A6NDA9 550 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 FAM171A2A8MVW0 826 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 LEFTY2O00292 366 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 KCNAB3O43448 404 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
VPS52-212ENST00000445902 REEP5Q00765 189 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 SWI5Q1ZZU3 235 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 TMEM64Q6YI46 380 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 HTR3DQ70Z44 454 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 RNF180Q86T96 592 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 TNFRSF13CQ96RJ3 184 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 KCNK15Q9H427 330 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 SLC23A2Q9UGH3 650 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 PCDHB10Q9UN67 800 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 EML5Q05BV3 1969 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 ZNF749O43361 778 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 ADAM11O75078 769 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 SLC25A12O75746 678 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 RCBTB2O95199 551 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 GP1BAP07359 652 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms