RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TP53I11O14683 189 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ZNF264O43296 627 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 KCNK2O95069 426 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 TGM4P49221 684 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 GK2Q14410 553 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-206ENST00000445265 SSX1Q16384 188 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 YIF1BQ5BJH7 314 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 MCEMP1Q8IX19 187 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 TMEM156Q8N614 296 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 DSCR3O14972 297 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 NPR2P20594 1047 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 FGF9P31371 208 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-206ENST00000445265 FAM76BQ5HYJ3 339 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 ZNF578Q96N58 590 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-206ENST00000445265 GAS2L1Q99501 681 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-206ENST00000445265 SLC38A1Q9H2H9 487 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 NTNG1Q9Y2I2 539 aa15.4■□□□□ 0.06
TCOF1-206ENST00000445265 TMEM212A6NML5 194 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 SLC2A10O95528 541 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 TRHRP34981 398 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-206ENST00000445265 MRPS21P82921 87 aaKnown RBP15.39■□□□□ 0.05
TCOF1-206ENST00000445265 LNX2Q8N448 690 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 HIST1H2AAQ96QV6 131 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 F5P12259 2224 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 SULT1B1O43704 296 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 CCR9P51686 369 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 RASGRP3Q8IV61 690 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 ADGRF3Q8IZF5 1079 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 SDK1Q7Z5N4 2213 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 ZNF217O75362 1048 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 F13BP05160 661 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 AQP2P41181 271 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 CRYBB2P43320 205 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 CBFBQ13951 182 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 RBMS2Q15434 407 aaKnown RBP15.39■□□□□ 0.05
TCOF1-206ENST00000445265 WDR45BQ5MNZ6 344 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 TMEM244Q5VVB8 128 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 PRR22Q8IZ63 422 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 THAP3Q8WTV1 239 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-206ENST00000445265 MRGPRX3Q96LB0 322 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 LRFN5Q96NI6 719 aa15.39■□□□□ 0.05
TCOF1-206ENST00000445265 TSNAXQ99598 290 aaKnown RBP15.39■□□□□ 0.05
TCOF1-206ENST00000445265 SLC16A7O60669 478 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 RAD1O60671 282 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 KLK3P07288 261 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CD14P08571 375 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 DCAF7P61962 342 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 GSG1LQ6UXU4 331 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 IL17RCQ8NAC3 791 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 OR1E3Q8WZA6 343 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 SHDQ96IW2 340 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 PCDHB16Q9NRJ7 776 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TBC1D29Q9UFV1 150 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 SLC6A14Q9UN76 642 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 ETV7Q9Y603 341 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 PEX12O00623 359 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TNFRSF10CO14798 259 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TP53P04637 393 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CLDN12P56749 244 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TAS2R19P59542 299 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CD300LDQ6UXZ3 194 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 USP53Q70EK8 1073 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 OVCH1Q7RTY7 1134 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 PHB2Q99623 299 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 ELOVL3Q9HB03 270 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TRIM64A6NGJ6 449 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 KDM4EB2RXH2 506 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 YY2O15391 372 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 SYT7O43581 403 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CLDN20P56880 219 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CDK5Q00535 292 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 ESCO2Q56NI9 601 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 C19orf47Q8N9M1 422 aaKnown RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 DEFB126Q9BYW3 111 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 NCDNQ9UBB6 729 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 RGPD3A6NKT7 1758 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 RGPD4Q7Z3J3 1758 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 PRAMEF4O60810 478 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 AMY2BP19961 511 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 SOX18P35713 384 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 GZMKP49863 264 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 DAP3P51398 398 aaKnown RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 RACK1P63244 317 aaKnown RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CYCSP99999 105 aaKnown RBP15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TLE3Q04726 772 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 CHRFAM7AQ494W8 412 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 PRAMEF9Q5VWM5 478 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 BBS1Q8NFJ9 593 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 DDIT4LQ96D03 193 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TCTN2Q96GX1 697 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 TEX101Q9BY14 249 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 PLA2G12AQ9BZM1 189 aa15.38■□□□□ 0.05
TCOF1-206ENST00000445265 A6NL46 340 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 CTNSO60931 367 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 INHBBP09529 407 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 MEF2DQ14814 521 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 TMEM106AQ96A25 262 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 FKBP14Q9NWM8 211 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms