RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 DNM1P46Q6ZS02 220 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 MSANTD1Q6ZTZ1 278 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 AAED1Q7RTV5 226 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 GPAT4Q86UL3 456 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 MUC15Q8N387 334 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 WDR31Q8NA23 367 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 AURKBQ96GD4 344 aaPredicted RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 TMEM19Q96HH6 336 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 RHNO1Q9BSD3 238 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 SF3B5Q9BWJ5 86 aaKnown RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 ARMC7Q9H6L4 198 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 THUMPD1Q9NXG2 353 aaKnown RBP18.46■□□□□ 0.55
VSX1-206ENST00000444511 ZNF232Q9UNY5 417 aa18.46■□□□□ 0.55
VSX1-206ENST00000444511 AQP7P3A6NL99 342 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 A8MVM7 634 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 MPGP29372 298 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 POLR2JP52435 117 aaKnown RBP18.45■□□□□ 0.54
VSX1-206ENST00000444511 IRX1P78414 480 aaPredicted RBP18.45■□□□□ 0.54
VSX1-206ENST00000444511 BNIP2Q12982 314 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 TMEM225Q6GV28 225 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 C11orf71Q6IPW1 123 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 KLHL24Q6TFL4 600 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 B3GLCTQ6Y288 498 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 MAVSQ7Z434 540 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 POMGNT2Q8NAT1 580 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 ZNF385AQ96PM9 386 aaKnown RBP18.45■□□□□ 0.54
VSX1-206ENST00000444511 OR52B2Q96RD2 323 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 FKRPQ9H9S5 495 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 ADPRHL2Q9NX46 363 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 ADAM21Q9UKJ8 722 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 ATP23Q9Y6H3 246 aa18.45■□□□□ 0.54
VSX1-206ENST00000444511 A0A0G2JPF8 293 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 FAM234BA2RU67 622 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 HNRNPCL2B2RXH8 293 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 HNRNPCL3B7ZW38 293 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 HNRNPCL1O60812 293 aaKnown RBP18.44■□□□□ 0.54
VSX1-206ENST00000444511 KRT33AO76009 404 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 HNRNPCL4P0DMR1 293 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
VSX1-206ENST00000444511 PRPS1P60891 318 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 RAB35Q15286 201 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 C1QTNF12Q5T7M4 302 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 ZNF544Q6NX49 715 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 ABHD12BQ7Z5M8 362 aaPredicted RBP18.44■□□□□ 0.54
VSX1-206ENST00000444511 MIER2Q8N344 545 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 CLIP4Q8N3C7 705 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 ZIC4Q8N9L1 334 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 OR9I1Q8NGQ6 314 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 VPS33AQ96AX1 596 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 SPATA9Q9BWV2 254 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 PIF1Q9H611 641 aa18.44■□□□□ 0.54
VSX1-206ENST00000444511 WNT11O96014 354 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 PRG2P13727 222 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 SLC25A3Q00325 362 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 C1orf140Q5VVS0 124 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 CLEC2AQ6UVW9 174 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 MDFIQ99750 246 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 IFT52Q9Y366 437 aa18.43■□□□□ 0.54
VSX1-206ENST00000444511 A0A096LPI6 279 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 FRS3O43559 492 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 TLX2O43763 284 aaPredicted RBP18.42■□□□□ 0.54
VSX1-206ENST00000444511 CD5LO43866 347 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 VAMP5O95183 116 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 BMP4P12644 408 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 ZNF311Q5JNZ3 666 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 SERPINA11Q86U17 422 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 C3orf49Q96BT1 292 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 TLCD1Q96CP7 247 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 RAD21L1Q9H4I0 556 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 YAE1D1Q9NRH1 226 aa18.42■□□□□ 0.54
VSX1-206ENST00000444511 IGHV4-30-2A0A087WSY4 118 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 KLF11O14901 512 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 ERLIN1O75477 346 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 AHSA1O95433 338 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 DSCR9P59020 149 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 CHRNB3Q05901 458 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 RGNQ15493 299 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 HIKESHIQ53FT3 197 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 PRAMEF8Q5VWM4 474 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 PRAMEF7Q5VXH5 474 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 STK35Q8TDR2 534 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 HTRA1Q92743 480 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 GTF2H4Q92759 462 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 TMBIM4Q9HC24 238 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 TMEM45AQ9NWC5 275 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 CHST2Q9Y4C5 530 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 PCDHB14Q9Y5E9 798 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 USH1CQ9Y6N9 552 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 DNHD1Q96M86 4753 aa18.41■□□□□ 0.54
VSX1-206ENST00000444511 C5orf58C9J3I9 102 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 ZNF587BE7ETH6 402 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 ATP6V1G2-DDX39BF2Z307 99 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 H7C417 338 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 CLIC1O00299 241 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 NUDT7P0C024 238 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 P2RY4P51582 365 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 STX1BP61266 288 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 SLC2A7Q6PXP3 512 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 CREB3L2Q70SY1 520 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 OR10H5Q8NGA6 315 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms