RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ARFIP1P53367 373 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRA2BP62995 288 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF91Q05481 1191 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 IKZF1Q13422 519 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SYT14P1Q58G82 188 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM211Q6ICI0 200 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 C1orf94Q6P1W5 598 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZER1Q7Z7L7 766 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 YRDCQ86U90 279 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 AKAP14Q86UN6 197 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 CLIP4Q8N3C7 705 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 AMER2Q8N7J2 671 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR56A1Q8NGH5 318 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 SNX18Q96RF0 628 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 FAM173AQ9BQD7 235 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 POLDIP3Q9BY77 421 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 MMP25Q9NPA2 562 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 PRDM7Q9NQW5 492 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 ERVK13-1Q9NX77 482 aa6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 WBP11Q9Y2W2 641 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-208ENST00000442054 FITM1A5D6W6 292 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 WASHC1A8K0Z3 465 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 LOC110117498-PIK3R3F6TDL0 507 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 EMC8O43402 210 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ITGA2P17301 1181 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 POU3F2P20265 443 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 DUSP2Q05923 314 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ACSM1Q08AH1 577 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 LARS2Q15031 903 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 LTB4RQ15722 352 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 C1QL3Q5VWW1 255 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 REEP3Q6NUK4 255 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 IQCF2Q8IXL9 164 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR8D4Q8NGM9 314 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 PIK3R3Q92569 461 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 CHCHD6Q9BRQ6 235 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 G6PC3Q9BUM1 346 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM185BQ9H7F4 350 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 NEUROD4Q9HD90 331 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 TIGARQ9NQ88 270 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 MAT2BQ9NZL9 334 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 RHCGQ9UBD6 479 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ERRFI1Q9UJM3 462 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 CES1P1Q9UKY3 287 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 EDARQ9UNE0 448 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 NINQ8N4C6 2090 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 PKDREJQ9NTG1 2253 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 GADD45GO95257 159 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 COX6A1P12074 109 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 PEPDP12955 493 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 FGF9P31371 208 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 CD79BP40259 229 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 RNF144AP50876 292 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 TPBGQ13641 420 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 GANABQ14697 944 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ACSM5Q6NUN0 579 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 NR2C2APQ86WQ0 139 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 CLDN22Q8N7P3 220 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 VANGL1Q8TAA9 524 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 OMA1Q96E52 524 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC30A2Q9BRI3 323 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 PLA2G12AQ9BZM1 189 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 BCL2L10Q9HD36 194 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC22A11Q9NSA0 550 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 C14orf119Q9NWQ9 140 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 TXNL4BQ9NX01 149 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SEMA5BQ9P283 1151 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 GRIP1Q9Y3R0 1128 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 KDM4EB2RXH2 506 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 DVL2O14641 736 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SNPHO15079 494 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 LALBAP00709 142 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 OPN1LWP04000 364 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 COX6B1P14854 86 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 DPP4P27487 766 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 RPS5P46782 204 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 EIF1AXP47813 144 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SNRPNP63162 240 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 CRTC2Q53ET0 693 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 C4orf17Q53FE4 359 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 YIF1BQ5BJH7 314 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC48A1Q6P1K1 146 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 POC5Q8NA72 575 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 RND1Q92730 232 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPACA9Q96E40 222 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM19Q96HH6 336 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF582Q96NG8 517 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF700Q9H0M5 742 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC26A1Q9H2B4 701 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 NEK6Q9HC98 313 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 MOV10Q9HCE1 1003 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 KCNJ16Q9NPI9 418 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 STUB1Q9UNE7 303 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZGRF1Q86YA3 2104 aa6.73□□□□□ -1.33
CDC42BPA-208ENST00000442054 PROM1O43490 865 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 IL1AP01583 271 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 LIMS3P0CW19 117 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 LIMS4P0CW20 117 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 IL7P13232 177 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms