RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 SLC17A1Q14916 467 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 ANKRD16Q6P6B7 361 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 THSD4Q6ZMP0 1018 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 TMEM45BQ96B21 275 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 MTERF3Q96E29 417 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 ANKRD27Q96NW4 1050 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 TSSK3Q96PN8 268 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 CCT8L2Q96SF2 557 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 CCT7Q99832 543 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 SUCNR1Q9BXA5 334 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 NMUR2Q9GZQ4 415 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 CTPS2Q9NRF8 586 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 GPATCH2Q9NW75 528 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 C1orf109Q9NX04 203 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 TMEM181Q9P2C4 612 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 CHRNA9Q9UGM1 479 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 FAF1Q9UNN5 650 aaPredicted RBP8.65□□□□□ -1.02
SYN3-204ENST00000441821 KCNE3Q9Y6H6 103 aa8.65□□□□□ -1.02
SYN3-204ENST00000441821 LYNX1G3V0Z9 82 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 EIF1BO60739 113 aaKnown RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 EDF1O60869 148 aaKnown RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 DCTN3O75935 186 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 CSTAP01040 98 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 IGLV1-44P01699 117 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 TFP02787 698 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 CECR9P0C854 216 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 LYNX1P0DP58 116 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 SDC1P18827 310 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 CDH2P19022 906 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 EFNA1P20827 205 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 CALCRP30988 508 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 THBS4P35443 961 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 ASMTP46597 345 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 CCT3P49368 545 aaKnown RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 IL1RL1Q01638 556 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 POU3F1Q03052 451 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 BST1Q10588 318 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 FOXL1Q12952 345 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 ZNF141Q15928 474 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 ADRM1Q16186 407 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 TBRG1Q3YBR2 411 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 MIDNQ504T8 468 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 FAHD2BQ6P2I3 314 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 C1orf229Q6ZS94 237 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 SPATA21Q7Z572 469 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 ABHD12BQ7Z5M8 362 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 FAM169BQ8N8A8 192 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 POMGNT2Q8NAT1 580 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 CCDC197Q8NCU1 140 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 OR56A1Q8NGH5 318 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 OR51F2Q8NH61 342 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 CLDND2Q8NHS1 167 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 PSMA8Q8TAA3 256 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 MRPL24Q96A35 216 aaKnown RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 DNAJA3Q96EY1 480 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 FAHD2AQ96GK7 314 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 FCRL1Q96LA6 429 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 ZNF317Q96PQ6 595 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 SDF2Q99470 211 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 NAA11Q9BSU3 229 aaPredicted RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 RACGAP1Q9H0H5 632 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 LPAR2Q9HBW0 351 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 MOV10Q9HCE1 1003 aaKnown RBP8.64□□□□□ -1.03
SYN3-204ENST00000441821 TMEM45AQ9NWC5 275 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 EMCNQ9ULC0 261 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 TRIM33Q9UPN9 1127 aa8.64□□□□□ -1.03
SYN3-204ENST00000441821 ARPC4-TTLL3A0A0A6YYG9 625 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 TRAV20A0A0B4J274 112 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 SH3PXD2BA1X283 911 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 G3V2L1 256 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 SLC28A1O00337 649 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 EBAG9O00559 213 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 PNPP00491 289 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 ADRA2AP08913 450 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 UBTFL6P0CB48 400 aaPredicted RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 HKR1P10072 659 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 GAAP10253 952 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 UROSP10746 265 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 GPR6P46095 362 aaPredicted RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 UBE2NP61088 152 aaKnown RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 SLC35A1P78382 337 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 HGFACQ04756 655 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 TP53BP2Q13625 1128 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 GPR68Q15743 365 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 SLC9B1Q4ZJI4 515 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 EIF3MQ7L2H7 374 aaKnown RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 GRINAQ7Z429 371 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 R3HCC1LQ7Z5L2 792 aaKnown RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 ADGRG3Q86Y34 549 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 ZDHHC22Q8N966 263 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 ZIC4Q8N9L1 334 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 FAM71CQ8NEG0 241 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 OR1K1Q8NGR3 316 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 CLHC1Q8NHS4 586 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 ZNF563Q8TA94 476 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 MAGEE2Q8TD90 523 aaPredicted RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 BCL2L2Q92843 193 aaPredicted RBP8.63□□□□□ -1.03
SYN3-204ENST00000441821 OR7D2Q96RA2 312 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 MECRQ9BV79 373 aa8.63□□□□□ -1.03
SYN3-204ENST00000441821 OR11A1Q9GZK7 315 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms