RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SIGLEC6O43699 453 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 IL5P05113 134 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF136P52737 540 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 PRAMEF8Q5VWM4 474 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 PRAMEF7Q5VXH5 474 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 C11orf88Q6PI97 169 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 OR4C6Q8NH72 309 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 DOK4Q8TEW6 326 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 TMEM239Q8WW34 195 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 HERVK_113Q902F9 699 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 COL26A1Q96A83 441 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 DPEP2Q9H4A9 486 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF768Q9H5H4 540 aaKnown RBP18.67■□□□□ 0.58
SHOX2-203ENST00000441443 TMEM138Q9NPI0 162 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 TM7SF3Q9NS93 570 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 SLC23A2Q9UGH3 650 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF223Q9UK11 482 aaPredicted RBP18.67■□□□□ 0.58
SHOX2-203ENST00000441443 FOXJ3Q9UPW0 622 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 ANKRD61A6NGH8 418 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 TMIGD3P0DMS9 266 aaPredicted RBP18.67■□□□□ 0.58
SHOX2-203ENST00000441443 ADH5P11766 374 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 MAOBP27338 520 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 HTR2AP28223 471 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 ART1P52961 327 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 OLFML2AQ68BL7 652 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 DNAAF1Q8NEP3 725 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 OR2L2Q8NH16 312 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 BADQ92934 168 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 SLC25A28Q96A46 364 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 S100A16Q96FQ6 103 aaKnown RBP18.67■□□□□ 0.58
SHOX2-203ENST00000441443 CRISPLD2Q9H0B8 497 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 USP36Q9P275 1121 aaKnown RBP18.67■□□□□ 0.58
SHOX2-203ENST00000441443 MLXQ9UH92 298 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 MOKQ9UQ07 419 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 SLC35A3Q9Y2D2 325 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 SLC6A5Q9Y345 797 aa18.67■□□□□ 0.58
SHOX2-203ENST00000441443 IDSB3KWA1 339 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 OGG1O15527 345 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 CDC123O75794 336 aaPredicted RBP18.66■□□□□ 0.58
SHOX2-203ENST00000441443 SLC2A5P22732 501 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 CSNK1G2P78368 415 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 STX4Q12846 297 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 PRDM9Q9NQV7 894 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 PURGQ9UJV8 347 aaKnown RBP18.66■□□□□ 0.58
SHOX2-203ENST00000441443 ADAM29Q9UKF5 820 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 A0A087WV48 116 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 OTOL1A6NHN0 477 aaPredicted RBP18.66■□□□□ 0.58
SHOX2-203ENST00000441443 H7C2Y5 167 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 PRAMEF2O60811 474 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 CSNK2A2P19784 350 aaPredicted RBP18.66■□□□□ 0.58
SHOX2-203ENST00000441443 PPP2CBP62714 309 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 PPP2CAP67775 309 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 MUC20Q8N307 709 aaPredicted RBP18.66■□□□□ 0.58
SHOX2-203ENST00000441443 SNX33Q8WV41 574 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 ACTR10Q9NZ32 417 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 CALML5Q9NZT1 146 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 WDR45Q9Y484 360 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 ACOT4Q8N9L9 421 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 OR2AK2Q8NG84 335 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 SPPL3Q8TCT6 385 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 TNFAIP8L1Q8WVP5 186 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 BPIFA2Q96DR5 249 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 RSPRY1Q96DX4 576 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 UQCC2Q9BRT2 126 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 PBX4Q9BYU1 374 aa18.66■□□□□ 0.58
SHOX2-203ENST00000441443 A0A1W2PPV9 198 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 MPTX1A8MV57 137 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF749O43361 778 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 RCBTB2O95199 551 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 PAPLNO95428 1278 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 CERS1P27544 350 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 FGL1Q08830 312 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 FAM111BQ6SJ93 734 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 NUDT18Q6ZVK8 323 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 OR4D10Q8NGI6 311 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 OTUB2Q96DC9 234 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 XKR8Q9H6D3 395 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 IL23AQ9NPF7 189 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 OR5V1Q9UGF6 321 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 SIGLEC7Q9Y286 467 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 MDC1Q14676 2089 aaKnown RBP18.65■□□□□ 0.58
SHOX2-203ENST00000441443 NPIPA5A0A0B4J1W7 369 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 NPIPA7E9PJI5 369 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 NPIPA8P0DM63 369 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF3P17036 446 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 MPGP29372 298 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 WASP42768 502 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 PWWP2BQ6NUJ5 590 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 SP7Q8TDD2 431 aaPredicted RBP18.65■□□□□ 0.58
SHOX2-203ENST00000441443 ERVK-19Q9WJR5 959 aa18.65■□□□□ 0.58
SHOX2-203ENST00000441443 TRAPPC13A5PLN9 417 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 MPIP34949 423 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 GMFBP60983 142 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 TRA2BP62995 288 aaKnown RBP18.64■□□□□ 0.57
SHOX2-203ENST00000441443 ACTC1P68032 377 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 ACTA1P68133 377 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 IL10RAQ13651 578 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 SLC36A1Q7Z2H8 476 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 LINC01555Q8NAE3 123 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 SDR9C7Q8NEX9 313 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms