RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SLC26A11Q86WA9 606 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 OR6C4Q8NGE1 309 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 OR9G1Q8NH87 305 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 RNF2Q99496 336 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 ZSCAN5AQ9BUG6 496 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 SLC25A39Q9BZJ4 359 aaPredicted RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 NHEJ1Q9H9Q4 299 aaPredicted RBP3.17□□□□□ -1.9
PFDN4-202ENST00000441080 SMOXQ9NWM0 555 aa3.17□□□□□ -1.9
PFDN4-202ENST00000441080 GTF3C1Q12789 2109 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 A6NDX4 124 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 AGPAT2O15120 278 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 MED7O43513 233 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 GIPP09681 153 aaPredicted RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 CHTF8P0CG12 524 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 ICAM2P13598 275 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 POU2F1P14859 743 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 RCC1P18754 421 aaPredicted RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 GLP1RP43220 463 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 RPS10P46783 165 aaKnown RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 GPM6AP51674 278 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 DLX1P56177 255 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 TNFRSF17Q02223 184 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 MICBQ29980 383 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 GALNT17Q6IS24 598 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 C6orf89Q6UWU4 347 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 ACP7Q6ZNF0 438 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 RALGPS2Q86X27 583 aaPredicted RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 VSTM4Q8IW00 320 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 ARIH2OSQ8N7S6 290 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 Q8N9L7 120 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 Q8N9W7 124 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 ARPC1AQ92747 370 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 CMTM7Q96FZ5 175 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 CLCC1Q96S66 551 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 SECISBP2Q96T21 854 aaKnown RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 MRPL45Q9BRJ2 306 aaKnown RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 CHRDL1Q9BU40 450 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 ACTR6Q9GZN1 396 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 ROGDIQ9GZN7 287 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 THUMPD1Q9NXG2 353 aaKnown RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 HOXC10Q9NYD6 342 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 TMCO1Q9UM00 188 aa3.16□□□□□ -1.9
PFDN4-202ENST00000441080 PRG3Q9Y2Y8 225 aaPredicted RBP3.16□□□□□ -1.9
PFDN4-202ENST00000441080 TRBV6-6A0A0A6YYG2 114 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 NSG1A0A0A6YYJ2 146 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 IQANK1A0A1B0GTG1 560 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 TCRBV9S1A1TA0A576 114 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 A8MXQ7 604 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 LOC110117498-PIK3R3F6TDL0 507 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 KRTAP4-16G5E9R7 235 aaPredicted RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 TNFSF13O75888 250 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 OXSR1O95747 527 aaPredicted RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 PCMT1P22061 227 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 GNA11P29992 359 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 QARSP47897 775 aaKnown RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 CSNK1DP48730 415 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 ARRB1P49407 418 aaPredicted RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 SPIBQ01892 262 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 KLRB1Q12918 225 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 VGLL4Q14135 290 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 ATP6AP1Q15904 470 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 BOLA3Q53S33 107 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 CARD16Q5EG05 197 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 DMRTC1Q5HYR2 192 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 C1orf220Q5T0J3 134 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 MFSD6LQ8IWD5 586 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF540Q8NDQ6 660 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 STEAP2Q8NFT2 490 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 IL22RA2Q969J5 263 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 UBE2E3Q969T4 207 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 OR2M2Q96R28 347 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 OR11A1Q9GZK7 315 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 C6orf203Q9P0P8 240 aaPredicted RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 SEC14L3Q9UDX4 400 aa3.15□□□□□ -1.91
PFDN4-202ENST00000441080 NUFIP1Q9UHK0 495 aaKnown RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 PTBP2Q9UKA9 531 aaKnown RBP3.15□□□□□ -1.91
PFDN4-202ENST00000441080 RPAP1Q9BWH6 1393 aaPredicted RBP3.14□□□□□ -1.91
PFDN4-202ENST00000441080 FAM166BA8MTA8 275 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 PRKAB2O43741 272 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 MOSP00540 346 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 MMP1P03956 469 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 TOP1P11387 765 aaKnown RBP3.14□□□□□ -1.91
PFDN4-202ENST00000441080 FMO3P31513 532 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 GRIA1P42261 906 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 FGL1Q08830 312 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 OXA1LQ15070 435 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 EXOC3L2Q2M3D2 409 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 SFT2D3Q587I9 215 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 MARCH8Q5T0T0 291 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 AGBL2Q5U5Z8 902 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 OR4F3Q6IEY1 312 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 Q6P435 159 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 Q6ZPB1 254 aaPredicted RBP3.14□□□□□ -1.91
PFDN4-202ENST00000441080 COX15Q7KZN9 410 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 ZNF429Q86V71 674 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 MFSD9Q8NBP5 474 aa3.14□□□□□ -1.91
PFDN4-202ENST00000441080 NDRG1Q92597 394 aaKnown RBP3.14□□□□□ -1.91
PFDN4-202ENST00000441080 UFD1Q92890 307 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms