RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GFI1BQ5VTD9 330 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MLIPQ5VWP3 458 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SAXO2Q658L1 398 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DUS1LQ6P1R4 473 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CEACAM20Q6UY09 585 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRSS48Q7RTY5 328 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 C6orf120Q7Z4R8 191 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARHGAP22Q7Z5H3 698 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ADCK2Q7Z695 626 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC35F3Q8IY50 421 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENTHD1Q8IYW4 607 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC5A8Q8N695 610 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 LINC01555Q8NAE3 123 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF540Q8NDQ6 660 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TTLQ8NG68 377 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR10G2Q8NGC3 310 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR52E1Q8NGJ3 308 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR4C15Q8NGM1 316 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR2A1Q8NGT9 310 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR52J3Q8NH60 311 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR5AK3PQ8NH89 298 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CNIH3Q8TBE1 160 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MIPOL1Q8TD10 442 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 RASSF5Q8WWW0 418 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 GEMIN6Q8WXD5 167 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DNASE2BQ8WZ79 361 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 KLK6Q92876 244 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SNAPC3Q92966 411 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MYDGFQ969H8 173 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 BORCS5Q969J3 196 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 EXOSC8Q96B26 276 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 NEURL3Q96EH8 262 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZBED6CLQ96FA7 236 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SIPA1Q96FS4 1042 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PDXPQ96GD0 296 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MYADMQ96S97 322 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF607Q96SK3 696 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 FEVQ99581 238 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PITX2Q99697 317 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 NRTNQ99748 197 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 BCL7BQ9BQE9 202 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PSD2Q9BQI7 771 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DCUN1D5Q9BTE7 237 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DPH7Q9BTV6 452 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 APOOQ9BUR5 198 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 FUNDC2Q9BWH2 189 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAIM2Q9BWQ8 316 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DGCR6LQ9BY27 220 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF717Q9BY31 904 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 GABARAPL3Q9BY60 117 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 XKR8Q9H6D3 395 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DDX31Q9H8H2 851 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF556Q9HAH1 456 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MRPS30Q9NP92 439 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 A4GALTQ9NPC4 353 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACSS1Q9NUB1 689 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLCXD1Q9NUJ7 323 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACER3Q9NUN7 267 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 IMP3Q9NV31 184 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 FBXL12Q9NXK8 326 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TAS2R7Q9NYW3 318 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENOPH1Q9UHY7 261 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACAD8Q9UKU7 415 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 RAB23Q9ULC3 237 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMCC3Q9ULS5 477 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SCML1Q9UN30 329 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SNX7Q9UNH6 387 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 RNF6Q9Y252 685 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 KCNK6Q9Y257 313 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 NCKAP1Q9Y2A7 1128 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC17A4Q9Y2C5 497 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 POFUT2Q9Y2G5 429 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 WDR37Q9Y2I8 494 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SH3GLB1Q9Y371 365 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 LSM4Q9Y4Z0 139 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR1A2Q9Y585 309 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 HEBP2Q9Y5Z4 205 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ENPP4Q9Y6X5 453 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 COLEC10Q9Y6Z7 277 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PTPRSQ13332 1948 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 DENND4CQ5VZ89 1909 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A0A6YYD5 115 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SH3PXD2BA1X283 911 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 LRIT2A6NDA9 550 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARRDC5A6NEK1 342 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRR23AA6NEV1 266 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 M0R3G1 203 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 HMGN4O00479 90 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC22A1O15245 554 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC31A1O15431 190 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 ERI3O43414 337 aaKnown RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SPRY1O43609 319 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC25A17O43808 307 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 MPZL2O60487 215 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 WBP4O75554 376 aaKnown RBP3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 SERPINB7O75635 380 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF432O94892 652 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 MFN2O95140 757 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 GADD45GO95257 159 aa3.13□□□□□ -1.91
HMGB3P11-201ENST00000440127 APBB3O95704 486 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms