RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 A0A096LPI6 279 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 AQP7P3A6NL99 342 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 POLR3GO15318 223 aaPredicted RBP16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 IGHV4-39P01824 125 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 CDH2P19022 906 aaPredicted RBP16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 PTNP21246 168 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 ACAA2P42765 397 aaKnown RBP16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 FOXG1P55316 489 aaPredicted RBP16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 DMTNQ08495 405 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 BNIP2Q12982 314 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 ZNF311Q5JNZ3 666 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 LSRQ86X29 649 aaPredicted RBP16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 CLIP4Q8N3C7 705 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 POMGNT2Q8NAT1 580 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 MAPK1IP1LQ8NDC0 245 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 TMEM45BQ96B21 275 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 DHRS9Q9BPW9 319 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 REG4Q9BYZ8 158 aa16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 GDF2Q9UK05 429 aaPredicted RBP16.21■□□□□ 0.19
AC004540.1-201ENST00000439120 CLIC1O00299 241 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 WNT11O96014 354 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 CD8AP01732 235 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 PRG2P13727 222 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 MPGP29372 298 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 FABP6P51161 128 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 SPOCK1Q08629 439 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 FADDQ13158 208 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 RGNQ15493 299 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 BEND6Q5SZJ8 279 aaPredicted RBP16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 C1orf140Q5VVS0 124 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 SLC2A7Q6PXP3 512 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 EPGNQ6UW88 154 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 SERPINA11Q86U17 422 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 LRRC8CQ8TDW0 803 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 GTF2H4Q92759 462 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 CACNG6Q9BXT2 260 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 FKRPQ9H9S5 495 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 A4GALTQ9NPC4 353 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 TCF7L2Q9NQB0 619 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 SLC17A5Q9NRA2 495 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 CBLN4Q9NTU7 201 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 RPS6KB2Q9UBS0 482 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 PCDHB14Q9Y5E9 798 aa16.2■□□□□ 0.18
AC004540.1-201ENST00000439120 CADP27708 2225 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 E7EQL1 145 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 PDLIM1O00151 329 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 FRS3O43559 492 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 SSX4O60224 188 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 NDUFS7O75251 213 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 VAMP5O95183 116 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 AHSA1O95433 338 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 GTF2E2P29084 291 aaKnown RBP16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 TTKP33981 857 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 NUDT6P53370 316 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 PRPS1P60891 318 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 C1QTNF12Q5T7M4 302 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 PRAMEF8Q5VWM4 474 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 PRAMEF7Q5VXH5 474 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 MUC15Q8N387 334 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 BBS10Q8TAM1 723 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 C7orf26Q96N11 449 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 ZNF385AQ96PM9 386 aaKnown RBP16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 AMBRA1Q9C0C7 1298 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 PAIP1Q9H074 479 aaKnown RBP16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 PIF1Q9H611 641 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 B3GALT5Q9Y2C3 310 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 ATP23Q9Y6H3 246 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 HIVEP2P31629 2446 aa16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 FN1P02751 2386 aaKnown RBP16.19■□□□□ 0.18
AC004540.1-201ENST00000439120 ABCA2Q9BZC7 2435 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 ELOA3DA6NLF2 546 aaPredicted RBP16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 TGDSO95455 350 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 BMP4P12644 408 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 ELOA3BQ3SY89 546 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 AGBL2Q5U5Z8 902 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 ZIC4Q8N9L1 334 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 WDR31Q8NA23 367 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 ELOA3Q8NG57 546 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 STK35Q8TDR2 534 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 MAL2Q969L2 176 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 C3orf49Q96BT1 292 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 RHNO1Q9BSD3 238 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 BCL2L10Q9HD36 194 aa16.18■□□□□ 0.18
AC004540.1-201ENST00000439120 ZANQ9Y493 2812 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 OR6C65A6NJZ3 312 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 ZNF587BE7ETH6 402 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 NR5A2O00482 541 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 NUDT7P0C024 238 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 RAB35Q15286 201 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 ZNF544Q6NX49 715 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 CLEC2AQ6UVW9 174 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 KRT73Q86Y46 540 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 DYDC1Q8WWB3 177 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 SLC25A36Q96CQ1 311 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 KCNS3Q9BQ31 491 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 TMEM45AQ9NWC5 275 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 CCDC167Q9P0B6 97 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 RASD1Q9Y272 281 aa16.17■□□□□ 0.18
AC004540.1-201ENST00000439120 PPIBP23284 216 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms