RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 LRRN3E7EW58 273 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 SHOX2O60902 331 aaPredicted RBP11.74□□□□□ -0.53
LINC00399-201ENST00000439008 ADAP00813 363 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 GPIP06744 558 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 C8BP07358 591 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 PSMB1P20618 241 aaKnown RBP11.74□□□□□ -0.53
LINC00399-201ENST00000439008 PEX19P40855 299 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 SLC7A2P52569 658 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 LIPEQ05469 1076 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 VEZF1Q14119 521 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 ALG10BQ5I7T1 473 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 OTUD3Q5T2D3 398 aaPredicted RBP11.74□□□□□ -0.53
LINC00399-201ENST00000439008 SEZ6L2Q6UXD5 910 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 LINC00114Q6XXX2 140 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 BEND4Q6ZU67 534 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 GALNT5Q7Z7M9 940 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 CDC20BQ86Y33 519 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 WDFY1Q8IWB7 410 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 MICU2Q8IYU8 434 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 KDM8Q8N371 416 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF385AQ96PM9 386 aaKnown RBP11.74□□□□□ -0.53
LINC00399-201ENST00000439008 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 SH3GL1Q99961 368 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 ARL8BQ9NVJ2 186 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 ADPRHL2Q9NX46 363 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 KLF4O43474 513 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 EIF1BO60739 113 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 PNMTP11086 282 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 CBLP22681 906 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 IGHV1-2P23083 117 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 KDELR2P33947 212 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 OR1E2P47887 323 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 GSK3BP49841 420 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 NUDT2P50583 147 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 LGALS3BPQ08380 585 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 ENTPD8Q5MY95 495 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 INTS11Q5TA45 600 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 FAM91A1Q658Y4 838 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 HACD2Q6Y1H2 254 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 SLC30A8Q8IWU4 369 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 BHLHE22Q8NFJ8 381 aaPredicted RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 OR2T12Q8NG77 320 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 MFSD8Q8NHS3 518 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 DNAJA4Q8WW22 397 aaPredicted RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 SLC25A36Q96CQ1 311 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 MED18Q9BUE0 208 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 POLDIP3Q9BY77 421 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 CLEC4MQ9H2X3 399 aaPredicted RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 EFCAB1Q9HAE3 211 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 C12orf10Q9HB07 376 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 RPS6KB2Q9UBS0 482 aa11.73□□□□□ -0.53
LINC00399-201ENST00000439008 NOSIPQ9Y314 301 aaKnown RBP11.73□□□□□ -0.53
LINC00399-201ENST00000439008 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ELOVL7A1L3X0 281 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 FMO6PO60774 539 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 LYZL6O75951 148 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 AHSA1O95433 338 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 HPRP00739 348 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 BGLAPP02818 100 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 CRYGSP22914 178 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 PRDX6P30041 224 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 CYBRD1Q53TN4 286 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 SFRP5Q5T4F7 317 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ERICH5Q6P6B1 374 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 NHLRC1Q6VVB1 395 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 Q6ZT83 130 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 STK32CQ86UX6 486 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 CARM1Q86X55 608 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 EPHX4Q8IUS5 362 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 OR9K2Q8NGE7 335 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ADAMTS16Q8TE57 1224 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 S100PBPQ96BU1 408 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ZHX1-C8orf76Q96EF9 292 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 SLC47A1Q96FL8 570 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 MOGAT1Q96PD6 335 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 CCT8L2Q96SF2 557 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 PRSS27Q9BQR3 290 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ACTR6Q9GZN1 396 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 PCDHAC1Q9H158 963 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 TMEM27Q9HBJ8 222 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ABCD2Q9UBJ2 740 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 NDRG3Q9UGV2 375 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 ARL2BPQ9Y2Y0 163 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 SNX13Q9Y5W8 968 aa11.72□□□□□ -0.53
LINC00399-201ENST00000439008 PRRC2AP48634 2157 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms