RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 A0A1W2PS29 197 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 SDHBP21912 280 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 BCKDHBP21953 392 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 PTPN6P29350 595 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 RPS5P46782 204 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 TGM4P49221 684 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 NXPH1P58417 271 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 CRMP1Q14194 572 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 C4orf46Q504U0 113 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 HSD17B12Q53GQ0 312 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 ACSM5Q6NUN0 579 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 MEPCEQ7L2J0 689 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 C1orf210Q8IVY1 113 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 SLC35F3Q8IY50 421 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 LRRC56Q8IYG6 542 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 JAGN1Q8N5M9 183 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 PMM1Q92871 262 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR2B2Q9GZK3 357 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 PLSCR3Q9NRY6 295 aa10.67□□□□□ -0.7
TRAPPC9-202ENST00000438773 SHISA7A6NL88 538 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 SEC14L5O43304 696 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 CHP2O43745 196 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 NUDT21O43809 227 aaKnown RBP10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 SCRN3Q0VDG4 424 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 MAPK14Q16539 360 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 MPEG1Q2M385 716 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 GXYLT1Q4G148 440 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 SYT14Q8NB59 555 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 GPR32P1Q8NGA4 272 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 FCRL1Q96LA6 429 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 ZNF582Q96NG8 517 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 GABARAPL3Q9BY60 117 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 ARRDC1-AS1Q9H2J1 176 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 HHATLQ9HCP6 504 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 R4GN57 208 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 TVP23AA6NH52 213 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 NCR1O76036 304 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 S100A9P06702 114 aaKnown RBP10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 MAPK3P27361 379 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 LAX1Q8IWV1 398 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 PFN4Q8NHR9 129 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 SLC2A12Q8TD20 617 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 CHRDQ9H2X0 955 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 TMEM9BQ9NQ34 198 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 ASB6Q9NWX5 421 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 NPIPA2E9PIF3 369 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 NPIPA3F8WFD2 350 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 L7N2F9 121 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 CLEC2LP0C7M8 214 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 S1PR1P21453 382 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 DNASE1P24855 282 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 AQP2P41181 271 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 GMFBP60983 142 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 DOC2BQ14184 412 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR7A5Q15622 319 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 HLA-BQ31612 363 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 ZMAT1Q5H9K5 638 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 AGAP6Q5VW22 663 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 LACC1Q8IV20 430 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR5H6Q8NGV6 325 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 AGAP4Q96P64 663 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 OR5B2Q96R09 309 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 ANKRD36A6QL64 1941 aa10.66□□□□□ -0.7
TRAPPC9-202ENST00000438773 ZAR1LA6NP61 321 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ALOX12BO75342 701 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ZNF20P17024 532 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 PEBP1P30086 187 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 FAUP35544 74 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 SEC23BQ15437 767 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 SGCAQ16586 387 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ATAD3CQ5T2N8 411 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 DDIT4LQ96D03 193 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.65□□□□□ -0.71e-7■■■■■ 27.2
TRAPPC9-202ENST00000438773 NXF5Q9H1B4 397 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 CHST8Q9H2A9 424 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 CCDC88CQ9P219 2028 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 IGHV1OR21-1A0A087WYE8 117 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 SOCS6O14544 535 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 EVI2BP34910 448 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ADH7P40394 386 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 GPR3P46089 330 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 FASLGP48023 281 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 TRAM1Q15629 374 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 MRM1Q6IN84 353 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 GALNT6Q8NCL4 622 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 IL17RDQ8NFM7 739 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 IFI44Q8TCB0 444 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 MED17Q9NVC6 651 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 IGKV1-8A0A0C4DH67 115 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 A6NCN8 305 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 H2BFMP0C1H6 154 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 ZNF43P17038 809 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 STOMP27105 288 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 PRAMEF20Q5VT98 475 aa10.65□□□□□ -0.7
TRAPPC9-202ENST00000438773 LINC00299Q6ZSB3 139 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms