RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 LIN52Q52LA3 116 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 C6orf10Q5SRN2 563 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 AAED1Q7RTV5 226 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 FBXL14Q8N1E6 418 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 ZNF525Q8N782 197 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 GLB1L3Q8NCI6 653 aaPredicted RBP11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 TMEM19Q96HH6 336 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 MAELQ96JY0 434 aaKnown RBP11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 ADAD1Q96M93 576 aaKnown RBP11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 RHNO1Q9BSD3 238 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 AMBRA1Q9C0C7 1298 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 TPT1P8Q9HAU6 139 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 ATRQ13535 2644 aa11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 HEATR1Q9H583 2144 aaKnown RBP11.47□□□□□ -0.57
CDCA4P4-201ENST00000435216 COL6A5A8TX70 2615 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 AQP7P3A6NL99 342 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 ATP6V1G2-DDX39BF2Z307 99 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 CD5LO43866 347 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 NUDT7P0C024 238 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 NCF2P19878 526 aaPredicted RBP11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 MPGP29372 298 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 SELENOPP49908 381 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 CRISP3P54108 245 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 MAGOHP61326 146 aaKnown RBP11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 COPZ1P61923 177 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 RAB35Q15286 201 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 GSTA3Q16772 222 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 ATG16L1Q676U5 607 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 TMEM225Q6GV28 225 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 WBP2NLQ6ICG8 309 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 SERPINA11Q86U17 422 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 MAL2Q969L2 176 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 TMEM45BQ96B21 275 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 MANSC1Q9H8J5 431 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 MOKQ9UQ07 419 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 AMDHD2Q9Y303 409 aa11.46□□□□□ -0.57
CDCA4P4-201ENST00000435216 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 A0A096LNT2 108 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 A8MVM7 634 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 UBDO15205 165 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 KRT33AO76009 404 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 LGI1O95970 557 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 P2RY4P51582 365 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 POLR2JP52435 117 aaKnown RBP11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 MAP2K6P52564 334 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 TUBA1BP68363 451 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 TUBA4AP68366 448 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 LARS2Q15031 903 aaKnown RBP11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 RNF220Q5VTB9 566 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 C1orf140Q5VVS0 124 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 SLC2A7Q6PXP3 512 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 CLEC2AQ6UVW9 174 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 TUBA1AQ71U36 451 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 CXXC5Q7LFL8 322 aaKnown RBP11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 CROCCP2Q86T23 111 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 KDM8Q8N371 416 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 C17orf78Q8N4C9 275 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 C3orf49Q96BT1 292 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 SLC25A36Q96CQ1 311 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 ITCHQ96J02 903 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 ALKBH3Q96Q83 286 aaPredicted RBP11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 TAPBPLQ9BX59 468 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 RMND5AQ9H871 391 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 SDR39U1Q9NRG7 319 aaPredicted RBP11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZIM2Q9NZV7 527 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 SEC14L4Q9UDX3 406 aa11.45□□□□□ -0.58
CDCA4P4-201ENST00000435216 RTTNQ86VV8 2226 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 SLCO1B7G3V0H7 640 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 NR5A2O00482 541 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 TLX2O43763 284 aaPredicted RBP11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZNF500O60304 480 aaPredicted RBP11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZCCHC18P0CG32 403 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 PRPS1P60891 318 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZNF311Q5JNZ3 666 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 PRAMEF8Q5VWM4 474 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 PRAMEF7Q5VXH5 474 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 HMBOX1Q6NT76 420 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 ZNF544Q6NX49 715 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 NIPAL3Q6P499 406 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 KLHL24Q6TFL4 600 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 CREB3L2Q70SY1 520 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 EPHX4Q8IUS5 362 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 POMGNT2Q8NAT1 580 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 OR10H5Q8NGA6 315 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 GTF2H4Q92759 462 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 FBXO17Q96EF6 278 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 SF3B5Q9BWJ5 86 aaKnown RBP11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 SPATA9Q9BWV2 254 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 RSPO3Q9BXY4 272 aaPredicted RBP11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 PAIP1Q9H074 479 aaKnown RBP11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 FKRPQ9H9S5 495 aa11.44□□□□□ -0.58
CDCA4P4-201ENST00000435216 NKIRAS1Q9NYS0 192 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms