RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PPA2Q9H2U2 334 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 TUBB1Q9H4B7 451 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 RGCCQ9H4X1 137 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 SUDS3Q9H7L9 328 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 SYNDIG1Q9H7V2 258 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 NT5MQ9NPB1 228 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 LZTFL1Q9NQ48 299 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 MRPL22Q9NWU5 206 aaKnown RBP2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 B3GNT2Q9NY97 397 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 EHFQ9NZC4 300 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 PSMC3IPQ9P2W1 217 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 CIDEBQ9UHD4 219 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 NOSIPQ9Y314 301 aaKnown RBP2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 STARD10Q9Y365 291 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 RHBDD3Q9Y3P4 386 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 AUP1Q9Y679 476 aa2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 TDRD15B5MCY1 1934 aaKnown RBP2.3□□□□□ -2.04
HMGB1P9-201ENST00000429856 USP6P35125 1406 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 LOC100506127A0A0U1RQW1 187 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 A0A1B0GTH9 108 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 BCLAF3A2AJT9 711 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SHISA9B4DS77 424 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF879B4DU55 563 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRDCB7Z8K6 153 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 K7ENP7 123 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF701M0R085 212 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC17A2O00624 439 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 RRP8O43159 456 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR10H3O60404 316 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF253O75346 499 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 GPX5O75715 221 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 NOL4O94818 638 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 H6PDO95479 791 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 STAMBPO95630 424 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 POP4O95707 220 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 GNA14O95837 355 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TSPAN13O95857 204 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TGM6O95932 706 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 MMP1P03956 469 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CCDC172P0C7W6 258 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 LAMP1P11279 417 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF43P17038 809 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TNNI1P19237 187 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 BCL3P20749 454 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 PRKACBP22694 351 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 U2AF2P26368 475 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ANXA13P27216 316 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 FGF9P31371 208 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 OPRD1P41143 372 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 PTGDSP41222 190 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SSR1P43307 286 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CRYBB2P43320 205 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 BCAP31P51572 246 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 RIDAP52758 137 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 DAOAP59103 153 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 IRX3P78415 501 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 FCHO2Q0JRZ9 810 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZNF239Q16600 458 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 KLHL38Q2WGJ6 581 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 Q3ZCU0 254 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 NHLRC3Q5JS37 347 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 DCST2Q5T1A1 773 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 METTL11BQ5VVY1 283 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC8B1Q6J4K2 584 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 VTCN1Q7Z7D3 282 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC22A18ASQ8N1D0 253 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CSNK1A1LQ8N752 337 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 POM121L12Q8N7R1 296 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CEP112Q8N8E3 955 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TRPV1Q8NER1 839 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR4C5Q8NGB2 326 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 OR4F6Q8NGB9 312 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ZPLD1Q8TCW7 415 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 GPX8Q8TED1 209 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ITLN1Q8WWA0 313 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 MAIP1Q8WWC4 291 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC38A4Q969I6 547 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 C9orf85Q96MD7 179 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 SLC35A5Q9BS91 424 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TUBGCP2Q9BSJ2 902 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CHCHD5Q9BSY4 110 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 C20orf24Q9BUV8 137 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TEKT3Q9BXF9 490 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CHIAQ9BZP6 476 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 NAT10Q9H0A0 1025 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 ADNPQ9H2P0 1102 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 PPDPFQ9H3Y8 114 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 FBXO44Q9H4M3 255 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 C8orf33Q9H7E9 229 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CAB39LQ9H9S4 337 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 AMBNQ9NP70 447 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 EXOSC3Q9NQT5 275 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 CHRAC1Q9NRG0 131 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 DHRS4-AS1Q9P1J3 65 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 WARS2Q9UGM6 360 aaKnown RBP2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 PITPNC1Q9UKF7 332 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 PEX16Q9Y5Y5 336 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 STYXL1Q9Y6J8 313 aa2.29□□□□□ -2.04
HMGB1P9-201ENST00000429856 TCRBV9S1A1TA0A576 114 aa2.28□□□□□ -2.04
HMGB1P9-201ENST00000429856 SMCO3A2RU48 225 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms