RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GJD3Q8N144 294 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 IL17RCQ8NAC3 791 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 OR5M1Q8NGP8 315 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 OR9A4Q8NGU2 314 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 WFIKKN2Q8TEU8 576 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 PPP1R14AQ96A00 147 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 RERGQ96A58 199 aaPredicted RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 ADAD1Q96M93 576 aaKnown RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 HRASLSQ9HDD0 168 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 FLRT3Q9NZU0 649 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 ADAM29Q9UKF5 820 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 SLC6A5Q9Y345 797 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 THSD7BQ9C0I4 1608 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 NUDT14O95848 222 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 IFNGP01579 166 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 HLA-DQB1P01920 261 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 MAOBP27338 520 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 GDI1P31150 447 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 LGALS3BPQ08380 585 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 HTR4Q13639 388 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 DMRTC1Q5HYR2 192 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 MRM1Q6IN84 353 aaKnown RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 OR2L8Q8NGY9 312 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 OR10AC1Q8NH08 325 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 FAM83CQ9BQN1 747 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 FBXL2Q9UKC9 423 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 FBXL3Q9UKT7 428 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 CDC14CA4D256 554 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 UBL3O95164 117 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 SRMP19623 302 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 PTH2RP49190 550 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 CCR9P51686 369 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 GARNL3Q5VVW2 1013 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 SLC35D2Q76EJ3 337 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 PRR22Q8IZ63 422 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 C2orf42Q9NWW7 574 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 H0YGG7 62 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 RNGTTO60942 597 aaKnown RBP11.47□□□□□ -0.57
CDH3-202ENST00000429102 TPOP07202 933 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 AQP2P41181 271 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ARF3P61204 181 aaPredicted RBP11.47□□□□□ -0.57
CDH3-202ENST00000429102 C4orf46Q504U0 113 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 FAM74A1Q5RGS3 127 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 LIN54Q6MZP7 749 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ADAMTSL4Q6UY14 1074 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 LRRC69Q6ZNQ3 347 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 LNX2Q8N448 690 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ADAMTS14Q8WXS8 1223 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 OR2M2Q96R28 347 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ISYNA1Q9NPH2 558 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ELF5Q9UKW6 265 aaPredicted RBP11.47□□□□□ -0.57
CDH3-202ENST00000429102 SLC27A6Q9Y2P4 619 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 PEX14O75381 377 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 NID1P14543 1247 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 HPGDP15428 266 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 PSMB1P20618 241 aaKnown RBP11.47□□□□□ -0.57
CDH3-202ENST00000429102 NRG3P56975 720 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 TMEM52BQ4KMG9 183 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 FIGLAQ6QHK4 219 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 GPALPP1Q8IXQ4 340 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 ETFBKMTQ8IXQ9 262 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 OR4D10Q8NGI6 311 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 SFXN5Q8TD22 340 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 OR1E3Q8WZA6 343 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 CNN2Q99439 309 aaKnown RBP11.47□□□□□ -0.57
CDH3-202ENST00000429102 LRIT1Q9P2V4 623 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 DAPP1Q9UN19 280 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 FARSAQ9Y285 508 aaKnown RBP11.47□□□□□ -0.57
CDH3-202ENST00000429102 DTX4Q9Y2E6 619 aa11.47□□□□□ -0.57
CDH3-202ENST00000429102 A0A0A6YYC8 382 aaPredicted RBP11.46□□□□□ -0.57
CDH3-202ENST00000429102 OR6C68A6NDL8 312 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 I3L1I5 382 aaPredicted RBP11.46□□□□□ -0.57
CDH3-202ENST00000429102 PLPP2O43688 288 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 CDK2P24941 298 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 ITPKBP27987 946 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 IGFALSP35858 605 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 AKR1C2P52895 323 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 NANOS3P60323 173 aaKnown RBP11.46□□□□□ -0.57
CDH3-202ENST00000429102 BTG1P62324 171 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 TNFRSF17Q02223 184 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 AKR1C1Q04828 323 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 C19orf57Q0VDD7 668 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 GAS6Q14393 721 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 ZIC1Q15915 447 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 PCGF3Q3KNV8 242 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 TMEM65Q6PI78 240 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 KIRREL2Q6UWL6 708 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 FAM219AQ8IW50 185 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 ZNF676Q8N7Q3 588 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 OR51A4Q8NGJ6 313 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 OR6N2Q8NGY6 317 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 FCAMRQ8WWV6 532 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 FAM3CQ92520 227 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 SLC25A36Q96CQ1 311 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 RBM18Q96H35 190 aaKnown RBP11.46□□□□□ -0.57
CDH3-202ENST00000429102 APOOQ9BUR5 198 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms