RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GPIP06744 558 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 CECR9P0C854 216 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 GIFP27352 417 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 ARRB2P32121 409 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 CHI3L1P36222 383 aaPredicted RBP15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 EMX2Q04743 252 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 LGALS3BPQ08380 585 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 ZSWIM7Q19AV6 140 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 SAXO2Q658L1 398 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 ANKRD16Q6P6B7 361 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 HPS1Q92902 700 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 BOD1Q96IK1 185 aa15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 ALKBH3Q96Q83 286 aaPredicted RBP15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 SF3B5Q9BWJ5 86 aaKnown RBP15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 MARCOQ9UEW3 520 aaPredicted RBP15.9■□□□□ 0.14
UPK3BP1-201ENST00000428678 LIPT2A6NK58 231 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 AQP7P3A6NL99 342 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 hCG_2039718K7EN88 272 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 NR5A2O00482 541 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 WIPF1O43516 503 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 LILRA1O75019 489 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 TACSTD2P09758 323 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 UQCRBP14927 111 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 CALCRP30988 508 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 SERPINB5P36952 375 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 MAP2K6P52564 334 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 CMIPQ8IY22 773 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 ZCCHC24Q8N2G6 241 aaKnown RBP15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 OR4F15Q8NGB8 312 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 OR8J2Q8NGG1 315 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 NEU4Q8WWR8 484 aaPredicted RBP15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 BCL2L2Q92843 193 aaPredicted RBP15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 NEURL3Q96EH8 262 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 DPY30Q9C005 99 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 ADAM19Q9H013 955 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 OCEL1Q9H607 264 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 SEC61A2Q9H9S3 476 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 ASIC5Q9NY37 505 aa15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 FBXO9Q9UK97 447 aaPredicted RBP15.89■□□□□ 0.13
UPK3BP1-201ENST00000428678 A0A096LPE4 126 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 PRSS51A0A1B0GVH4 220 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 A0A1W2PPZ6 126 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 TLDC2A0PJX2 215 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 PRAMEF27A3QJZ7 478 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 CFAP73A6NFT4 308 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 PAX7P23759 505 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 CXCR1P25024 350 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 CFPP27918 469 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 SELENOPP49908 381 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 CDH15P55291 814 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 ANXA8L1Q5VT79 327 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 TMEM225Q6GV28 225 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 SVOPLQ8N434 492 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 VPS37AQ8NEZ2 397 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 WDR60Q8WVS4 1066 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 PPP1R36Q96LQ0 422 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 SLC35A5Q9BS91 424 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 PIF1Q9H611 641 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 DYNLRB1Q9NP97 96 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 ADPRHL2Q9NX46 363 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 PCDHB14Q9Y5E9 798 aa15.88■□□□□ 0.13
UPK3BP1-201ENST00000428678 ARPC4-TTLL3A0A0A6YYG9 625 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 SH3PXD2BA1X283 911 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 AGAP5A6NIR3 686 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 VSTM5A8MXK1 200 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 HMGN4O00479 90 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 FAAHO00519 579 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 SPRY1O43609 319 aaPredicted RBP15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 SPAG7O75391 227 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 IFNGR1P15260 489 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 NPR2P20594 1047 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 THBS4P35443 961 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 HGFACQ04756 655 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 EPS8Q12929 822 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 CCNIQ14094 377 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 GNA13Q14344 377 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 SYPL1Q16563 259 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 C3orf36Q3SXR2 165 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 MRPL2Q5T653 305 aaKnown RBP15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 NIPAL3Q6P499 406 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 LINGO2Q7L985 606 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 SPATA21Q7Z572 469 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 ANKFN1Q8N957 763 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 NUP37Q8NFH4 326 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 TRNT1Q96Q11 434 aaKnown RBP15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 TAPBPLQ9BX59 468 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 SLC38A1Q9H2H9 487 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 CRNNQ9UBG3 495 aaPredicted RBP15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 METRNQ9UJH8 293 aa15.87■□□□□ 0.13
UPK3BP1-201ENST00000428678 OR6C65A6NJZ3 312 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 IGLV1-44P01699 117 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 C1QCP02747 245 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 CHRM4P08173 479 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 IL7RP16871 459 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 TRIP10Q15642 601 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 PDCD2Q16342 344 aaPredicted RBP15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 CREB3L2Q70SY1 520 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 RNF130Q86XS8 419 aa15.86■□□□□ 0.13
UPK3BP1-201ENST00000428678 ZNF786Q8N393 782 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms