RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SIDT1Q9NXL6 827 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 SIGLEC7Q9Y286 467 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 UNC119BA6NIH7 251 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 FAM183AA6NL82 134 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PIN1P1O15428 100 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 MAGEB4O15481 346 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 ITGA5P08648 1049 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 UCP2P55851 309 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 RPS13P62277 151 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 FUT5Q11128 374 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CNTN1Q12860 1018 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 MED27Q6P2C8 311 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 C9orf40Q8IXQ3 194 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZNF565Q8N9K5 539 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 FBXO32Q969P5 355 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SMIM8Q96KF7 97 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ELF4Q99607 663 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 BPIFA1Q9NP55 256 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 NCDNQ9UBB6 729 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CRLS1Q9UJA2 301 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CLCA2Q9UQC9 943 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 KDM4BO94953 1096 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZFPL1O95159 310 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZNF3P17036 446 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 GJA1P17302 382 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SRMP19623 302 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 DCTDP32321 178 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 MAP3K8P41279 467 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SLC11A2P49281 568 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 MAZP56270 477 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 RGS8P57771 180 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 PDZK1IP1Q13113 114 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 UBE2NLQ5JXB2 153 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ARL9Q6T311 187 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TAS1R1Q7RTX1 841 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TRAPPC5Q8IUR0 188 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 UBE2E3Q969T4 207 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 RSPRY1Q96DX4 576 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SEMA4GQ9NTN9 838 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 UQCC1Q9NVA1 299 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZNF197O14709 1029 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 THY1P04216 161 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 S100A9P06702 114 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 FCGR3AP08637 254 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 MPZP25189 248 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 INPP5JQ15735 1006 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 CEBPEQ15744 281 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZNF684Q5T5D7 378 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 DCAF12L2Q5VW00 463 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CBLN2Q8IUK8 224 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 LMAN1LQ9HAT1 526 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 GHRLQ9UBU3 117 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 OR14I1A6ND48 311 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PPM1DO15297 605 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZIC2O95409 532 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 BCHEP06276 602 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 HTR2AP28223 471 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 HNF1BP35680 557 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 EIF2S3P41091 472 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 SLC3A1Q07837 685 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TAF12Q16514 161 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PRSS45Q7RTY3 260 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 OR5AP2Q8NGF4 316 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 LPPQ93052 612 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 S100A16Q96FQ6 103 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 PARK7Q99497 189 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 GFI1Q99684 422 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CMSS1Q9BQ75 279 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 ORAI3Q9BRQ5 295 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 POTEKPQ9BYX7 375 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 FLVCR2Q9UPI3 526 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 Q9Y3F1 56 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 GNB5O14775 395 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ARPC1BO15143 372 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 KHDRBS3O75525 346 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 VNN2O95498 520 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 C1orf105O95561 183 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 IGF2P01344 180 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 GBAP04062 536 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CHRM4P08173 479 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 C1GALT1C1LP0DN25 315 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 HKR1P10072 659 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 NT5EP21589 574 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 BDKRB2P30411 391 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PRR5P85299 388 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TGM3Q08188 693 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ARHGAP19Q14CB8 494 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PRSS53Q2L4Q9 553 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 AVPI1Q5T686 147 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 HAGHLQ6PII5 290 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 IL34Q6ZMJ4 242 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TEX101Q9BY14 249 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 AUNIPQ9H7T9 357 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ADGRL4Q9HBW9 690 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SGK2Q9HBY8 427 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SDHAF3Q9NRP4 125 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TEX13DA0A0J9YY54 714 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 TMEM200CA6NKL6 621 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 KIAA0355O15063 1070 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms