RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ZFP90Q8TF47 636 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM18Q96B42 140 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NTNG2Q96CW9 530 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ELP4Q96EB1 424 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NEURL3Q96EH8 262 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 FAM120BQ96EK7 910 aaKnown RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ZBED6CLQ96FA7 236 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ITCHQ96J02 903 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 TXNDC15Q96J42 360 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF583Q96ND8 569 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 OR52E6Q96RD3 313 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 CGREF1Q99674 301 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 HOPXQ9BPY8 73 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ULBP3Q9BZM4 244 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 COPS7BQ9H9Q2 264 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NANOGQ9H9S0 305 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 EFCAB1Q9HAE3 211 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ATAD3AQ9NVI7 634 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 CMTM6Q9NX76 183 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 TAS2R9Q9NYW1 312 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 MAT2BQ9NZL9 334 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 AKAP7Q9P0M2 348 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 TRPC4Q9UBN4 977 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF282Q9UDV7 671 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 PISDQ9UG56 409 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NXT1Q9UKK6 140 aaKnown RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 FBXW2Q9UKT8 454 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 C19orf53Q9UNZ5 99 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 MAU2Q9Y6X3 613 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 SCN3AQ9NY46 2000 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 JMJD1CQ15652 2540 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 COL6A5A8TX70 2615 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 A0A1W2PRB8 838 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 PRORSD1PA6NEY8 169 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 IDSB3KWA1 339 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 NME4O00746 187 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 CLDN4O14493 209 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 RFXANKO14593 260 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 MRASO14807 208 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 GCM2O75603 506 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 TNFRSF6BO95407 300 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 C6orf47O95873 294 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 LDLRP01130 860 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 GUSBP08236 651 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 KRT16P08779 473 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 CT62P0C5K7 136 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 HSD17B1P14061 328 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 PORP16435 677 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 DDX5P17844 614 aaKnown RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 MAOAP21397 527 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 MPIP34949 423 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 FEN1P39748 380 aaKnown RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 EMDP50402 254 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 CRYBA2P53672 197 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ACTN3Q08043 901 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 CEACAM7Q14002 265 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SERTAD2Q14140 314 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SELPLGQ14242 412 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SF3B4Q15427 424 aaKnown RBP eCLIP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 GTDC1Q4AE62 458 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 GLIPR1L2Q4G1C9 344 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 C1orf189Q5VU69 101 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 FAM180BQ6P0A1 224 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 FAM199XQ6PEV8 388 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SPNS3Q6ZMD2 512 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ANKRD46Q86W74 232 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 PTOV1Q86YD1 416 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 OR4N5Q8IXE1 308 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ARHGAP24Q8N264 748 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 LRRC25Q8N386 305 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ESX1Q8N693 406 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 METTL27Q8N6F8 245 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF441Q8N8Z8 693 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 APCDD1LQ8NCL9 501 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 OR7G2Q8NG99 324 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 OR52E4Q8NGH9 312 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 OR1N1Q8NGS0 311 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 OR9A2Q8NGT5 310 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SFXN5Q8TD22 340 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 N4BP2L2Q92802 583 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 TSLPQ969D9 159 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 EXOSC8Q96B26 276 aaKnown RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 KLHL29Q96CT2 875 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 AURKBQ96GD4 344 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 IMMP1LQ96LU5 166 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 VSTM2LQ96N03 204 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ZBTB18Q99592 522 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 NPAS2Q99743 824 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SLC39A3Q9BRY0 314 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 BTBD10Q9BSF8 475 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 RSPO3Q9BXY4 272 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 MMADHCQ9H3L0 296 aaPredicted RBP4.94□□□□□ -1.62
C9orf3-205ENST00000427193 SYNDIG1Q9H7V2 258 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 WDR41Q9HAD4 459 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 TPT1P8Q9HAU6 139 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 MIEF1Q9NQG6 463 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 PRTFDC1Q9NRG1 225 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 GIN1Q9NXP7 522 aa4.94□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF223Q9UK11 482 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms