RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 OR6S1Q8NH40 331 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 PAQR8Q8TEZ7 354 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ASB15Q8WXK1 588 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ERMAPQ96PL5 475 aaPredicted RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 MND1Q9BWT6 205 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 RACGAP1Q9H0H5 632 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 WDR70Q9NW82 654 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 H2AFY2Q9P0M6 372 aaPredicted RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 AHCTF1Q8WYP5 2266 aa13.77□□□□□ -0.2
ACTB-204ENST00000425660 SPAARA0A1B0GVQ0 90 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 PRR23D1E9PI22 279 aaPredicted RBP13.77□□□□□ -0.21
ACTB-204ENST00000425660 J3QRE1 110 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 PRR23D2P0DMB1 279 aaPredicted RBP13.77□□□□□ -0.21
ACTB-204ENST00000425660 CSRP1P21291 193 aaKnown RBP13.77□□□□□ -0.21
ACTB-204ENST00000425660 SLC2A5P22732 501 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 CRMP1Q14194 572 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 ARSKQ6UWY0 536 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 MEPCEQ7L2J0 689 aaKnown RBP13.77□□□□□ -0.21
ACTB-204ENST00000425660 FAM122BQ7Z309 247 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 P2RY8Q86VZ1 359 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 FADS6Q8N9I5 356 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 WDSUB1Q8N9V3 476 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 SLC37A3Q8NCC5 494 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 ADAMTS17Q8TE56 1095 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 KISS1RQ969F8 398 aaPredicted RBP13.77□□□□□ -0.21
ACTB-204ENST00000425660 MRGPRX4Q96LA9 322 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 OR5M11Q96RB7 305 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 CLEC2DQ9UHP7 191 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 KLHL21Q9UJP4 597 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 ADAM18Q9Y3Q7 739 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 IER3IP1Q9Y5U9 82 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 PCSK5Q92824 1860 aa13.77□□□□□ -0.21
ACTB-204ENST00000425660 LOC101059948A0A1B0GTJ6 334 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 ANKRD33BA6NCL7 494 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 SLC22A31A6NKX4 558 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 ZNF208O43345 1280 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 IGHA1P01876 353 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 CD14P08571 375 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 HIST1H1CP16403 213 aaKnown RBP13.76□□□□□ -0.21
ACTB-204ENST00000425660 CCNA2P20248 432 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 CD82P27701 267 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
ACTB-204ENST00000425660 AQP2P41181 271 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 SPHARQ15513 63 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 PLPPR5Q32ZL2 321 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 GXYLT1Q4G148 440 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 ALG10Q5BKT4 473 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 C1orf140Q5VVS0 124 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 C1QL3Q5VWW1 255 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 FCRLBQ6BAA4 426 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 POMZP3Q6PJE2 187 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 IGFN1Q86VF2 1251 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 C10orf53Q8N6V4 93 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 OR2M3Q8NG83 312 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 MOSPD2Q8NHP6 518 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 SGCZQ96LD1 299 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 DDOQ99489 341 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 MGLLQ99685 303 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 NPAS1Q99742 590 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 KATNB1Q9BVA0 655 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 ANGPTL4Q9BY76 406 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 HAO2Q9NYQ3 351 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 SLC6A5Q9Y345 797 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 BLOC1S5-TXNDC5H3BN57 136 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 MASP2O00187 686 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 IMPA2O14732 288 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 OR2T1O43869 369 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 TXNDC12O95881 172 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 CD36P16671 472 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 MYL12AP19105 171 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 PAICSP22234 425 aaKnown RBP13.76□□□□□ -0.21
ACTB-204ENST00000425660 ZNF41P51814 821 aaPredicted RBP13.76□□□□□ -0.21
ACTB-204ENST00000425660 LSAMPQ13449 338 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 DOC2BQ14184 412 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 MED22Q15528 200 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 ARMCX4Q5H9R4 360 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 NANOGNBQ7Z5D8 188 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 TMEM156Q8N614 296 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 TEAD3Q99594 435 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 ZNF649Q9BS31 505 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 PROK2Q9HC23 129 aa13.76□□□□□ -0.21
ACTB-204ENST00000425660 EXOSC1Q9Y3B2 195 aaKnown RBP13.76□□□□□ -0.21
ACTB-204ENST00000425660 FAM186AA6NE01 2351 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 CCDC182A6NF36 153 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 CDRT15L2A8MXV6 281 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 FTCDNL1E5RQL4 147 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 TM4SF5O14894 197 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 SCG5P05408 212 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 RGS6P49758 472 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 ETV1P50549 477 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 RPL18Q07020 188 aaKnown RBP13.75□□□□□ -0.21
ACTB-204ENST00000425660 FOXF1Q12946 379 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 NFATC3Q12968 1075 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 SGCBQ16585 318 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 MAMDC2Q7Z304 686 aaPredicted RBP13.75□□□□□ -0.21
ACTB-204ENST00000425660 DTX1Q86Y01 620 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms