RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 NRSN1Q8IZ57 195 aa12.41□□□□□ -0.42
LRCH3-203ENST00000425562 MRPL43Q8N983 215 aaKnown RBP12.41□□□□□ -0.42
LRCH3-203ENST00000425562 SCARB1Q8WTV0 552 aa12.41□□□□□ -0.42
LRCH3-203ENST00000425562 ZNF75AQ96N20 296 aa12.41□□□□□ -0.42
LRCH3-203ENST00000425562 C12orf57Q99622 126 aa12.41□□□□□ -0.42
LRCH3-203ENST00000425562 USB1Q9BQ65 265 aaKnown RBP12.41□□□□□ -0.42
LRCH3-203ENST00000425562 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
LRCH3-203ENST00000425562 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
LRCH3-203ENST00000425562 A0A0A6YYD5 115 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 PAK4O96013 591 aaPredicted RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 SRMP19623 302 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 P2RY2P41231 377 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 NRG3P56975 720 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 CBFBQ13951 182 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 DUSP5Q16690 384 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 MUC20Q8N307 709 aaPredicted RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 BRIX1Q8TDN6 353 aaKnown RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 ANKRD19PQ9H560 264 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 IL21RQ9HBE5 538 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 ANKRD10Q9NXR5 420 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 ST6GALNAC2Q9UJ37 374 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 GMEB2Q9UKD1 530 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 CCSO14618 274 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 GALR3O60755 368 aaPredicted RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 NT5EP21589 574 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 P2RX1P51575 399 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 OR1Q1Q15612 314 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 MRPL2Q5T653 305 aaKnown RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 LIN54Q6MZP7 749 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 ATOH1Q92858 354 aaPredicted RBP12.4□□□□□ -0.42
LRCH3-203ENST00000425562 SEC22AQ96IW7 307 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 HHIPL1Q96JK4 782 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 DPYSL5Q9BPU6 564 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 PRSS27Q9BQR3 290 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 TMEM185BQ9H7F4 350 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 MLXQ9UH92 298 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 CYB5R1Q9UHQ9 305 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
LRCH3-203ENST00000425562 A0A1B0GUH1 482 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SLC22A31A6NKX4 558 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 D6RAR5 112 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 AIPO00170 330 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 KLF4O43474 513 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 TGM6O95932 706 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 LAMP2P13473 410 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 HIST1H1TP22492 207 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SERTAD2Q14140 314 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 FAM219AQ8IW50 185 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 BPIFCQ8NFQ6 507 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SETD7Q8WTS6 366 aaKnown RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 ULBP3Q9BZM4 244 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 DPEP2Q9H4A9 486 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 TMEM74BQ9NUR3 256 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 OPN4Q9UHM6 478 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 NPFFR2Q9Y5X5 522 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 A0A1W2PPV9 198 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 EMC8O43402 210 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 FGF2P09038 288 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SLC35G4P0C7Q5 338 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 IFNGR1P15260 489 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 MST1P26927 711 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 ITPKBP27987 946 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 RPS11P62280 158 aaKnown RBP eCLIP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SIRPAP78324 504 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 DYRK1AQ13627 763 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 HNRNPA1L2Q32P51 320 aaKnown RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 B3GNTL1Q67FW5 361 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 OVCH2Q7RTZ1 564 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 TMPRSS12Q86WS5 348 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 TMEM185AQ8NFB2 350 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 OR5K2Q8NHB8 316 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 PTDSS2Q9BVG9 487 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 WDR13Q9H1Z4 485 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 CACYBPQ9HB71 228 aaKnown RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 MEPEQ9NQ76 525 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 C2orf42Q9NWW7 574 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 MED11Q9P086 117 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SERGEFQ9UGK8 458 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 MYOGP15173 224 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 HIST1H1CP16403 213 aaKnown RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 VEGFBP49765 207 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 ZNF136P52737 540 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 RAP2BP61225 183 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 SHC2P98077 582 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 CSRP2Q16527 193 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 UBE2NLQ5JXB2 153 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 ERN2Q76MJ5 926 aaKnown RBP12.39□□□□□ -0.43
LRCH3-203ENST00000425562 CLRN3Q8NCR9 226 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 OR51S1Q8NGJ8 323 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 NMNAT3Q96T66 252 aa12.39□□□□□ -0.43
LRCH3-203ENST00000425562 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms