RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CHRNB3Q05901 458 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LTBQ06643 244 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ST3GAL3Q11203 375 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MYBPHQ13203 477 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 DGCR6Q14129 220 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 EIF2S3LQ2VIR3 472 aaKnown RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ACSF3Q4G176 576 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FAM98BQ52LJ0 330 aaKnown RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 NSUN5P2Q63ZY6 315 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 HBMQ6B0K9 141 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF585AQ6P3V2 769 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C5orf46Q6UWT4 87 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PLXDC2Q6UX71 529 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SPATA24Q86W54 205 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 P3H2Q8IVL5 708 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 UBQLNLQ8IYU4 475 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RPRMLQ8N4K4 120 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MARVELD2Q8N4S9 558 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ATP6V1C2Q8NEY4 427 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR6S1Q8NH40 331 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR10D3Q8NH80 312 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SMPDL3BQ92485 455 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OSTF1Q92882 214 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TAAR8Q969N4 342 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 DDIT4LQ96D03 193 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 KTI12Q96EK9 354 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF845Q96IR2 970 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MPP4Q96JB8 637 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LRGUKQ96M69 825 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR5B2Q96R09 309 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF347Q96SE7 839 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PIP5K1AQ99755 562 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CHID1Q9BWS9 393 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SRXN1Q9BYN0 137 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TRIM15Q9C019 465 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TP63Q9H3D4 680 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ANKRD19PQ9H560 264 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 DENND2DQ9H6A0 471 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CALHM2Q9HA72 323 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RHCGQ9UBD6 479 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TINAGQ9UJW2 476 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CAMK2AQ9UQM7 478 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OSGIN2Q9Y236 505 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SPIN1Q9Y657 262 aaPredicted RBP6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZGRF1Q86YA3 2104 aa6.32□□□□□ -1.4
CHCHD3P1-201ENST00000425516 NBASA2RRP1 2371 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TRAV36DV7A0A075B6V5 113 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MBD3L5A6NJ08 208 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 GJE1A6NN92 205 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CLCA1A8K7I4 914 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ANKRD65E5RJM6 399 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 E9PLN8 166 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SULT2B1O00204 365 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SEC14L5O43304 696 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 DNPH1O43598 174 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CIB2O75838 187 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TOXO94900 526 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 STAMBPO95630 424 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TGM6O95932 706 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 BGLAPP02818 100 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MT-ND1P03886 318 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 FABP3P05413 133 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 H1F0P07305 194 aaKnown RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TSPAN19P0C672 248 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 GLI4P10075 376 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ITGA2P17301 1181 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 HOXB6P17509 224 aaKnown RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 KLK2P20151 261 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SLC7A1P30825 629 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 CEACAM8P31997 349 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TIMP3P35625 211 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RBM34P42696 430 aaKnown RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ERFP50548 548 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 P2RY4P51582 365 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 UGT2B15P54855 530 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 KPNB1Q14974 876 aaKnown RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TRAM2Q15035 370 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SEC23BQ15437 767 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 ZNF239Q16600 458 aaKnown RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 PDSS1Q5T2R2 415 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C1orf185Q5T7R7 199 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C1orf146Q5VVC0 180 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C1orf140Q5VVS0 124 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TTC33Q6PID6 262 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TBPL2Q6SJ96 375 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 NHLRC1Q6VVB1 395 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 C3P1Q6ZMU1 363 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 RNF113BQ8IZP6 322 aaKnown RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 OR4C15Q8NGM1 316 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MFSD8Q8NHS3 518 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 SLC7A13Q8TCU3 470 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TMEM255BQ8WV15 326 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 TMEM239Q8WW34 195 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 LIPHQ8WWY8 451 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 DNAJA3Q96EY1 480 aa6.31□□□□□ -1.4
CHCHD3P1-201ENST00000425516 HS6ST2Q96MM7 605 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms