RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TMPRSS11FQ6ZWK6 438 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 ZNF843Q8N446 348 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 TCEANCQ8N8B7 351 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 OR2M7Q8NG81 312 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 OR4C3Q8NH37 302 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 TMEM255BQ8WV15 326 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 DNAJA4Q8WW22 397 aaPredicted RBP14.18□□□□□ -0.14
SHOX2-202ENST00000425436 CNOT9Q92600 299 aaKnown RBP14.18□□□□□ -0.14
SHOX2-202ENST00000425436 YIPF6Q96EC8 236 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 JSRP1Q96MG2 331 aaPredicted RBP14.18□□□□□ -0.14
SHOX2-202ENST00000425436 IL4I1Q96RQ9 567 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 PRSS27Q9BQR3 290 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 RTN4RQ9BZR6 473 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 RYDENQ9NUL5 291 aaKnown RBP14.18□□□□□ -0.14
SHOX2-202ENST00000425436 KLRF1Q9NZS2 232 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 RPS6KB2Q9UBS0 482 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 NTNG1Q9Y2I2 539 aa14.18□□□□□ -0.14
SHOX2-202ENST00000425436 A0A0B4J2E0 115 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 A0A1B0GX12 115 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 UNC119BA6NIH7 251 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 C17orf51A8MQB3 221 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 TLX2O43763 284 aaPredicted RBP14.17□□□□□ -0.14
SHOX2-202ENST00000425436 GABARAPO95166 117 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 ATE1O95260 518 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 CSTAP01040 98 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 STSP08842 583 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 PRG2P13727 222 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 HPGDP15428 266 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 PCSK6P29122 969 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 PTGDSP41222 190 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 COPZ1P61923 177 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 KLHL26Q53HC5 615 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 RPUSD3Q6P087 351 aaKnown RBP14.17□□□□□ -0.14
SHOX2-202ENST00000425436 APOOLQ6UXV4 268 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 ZNF620Q6ZNG0 422 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 ZNF367Q7RTV3 350 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 P2RY8Q86VZ1 359 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 KIF18BQ86Y91 864 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 ZNF614Q8N883 585 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 OR2T33Q8NG76 320 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 TMEM163Q8TC26 289 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 RFKQ969G6 155 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 SNRNP40Q96DI7 357 aaKnown RBP14.17□□□□□ -0.14
SHOX2-202ENST00000425436 TMEM80Q96HE8 168 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 SECISBP2Q96T21 854 aaKnown RBP14.17□□□□□ -0.14
SHOX2-202ENST00000425436 TSSK6Q9BXA6 273 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 ANGPTL4Q9BY76 406 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 AMBNQ9NP70 447 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 TBC1D23Q9NUY8 699 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 MRPS18AQ9NVS2 196 aaKnown RBP14.17□□□□□ -0.14
SHOX2-202ENST00000425436 COL6A6A6NMZ7 2263 aa14.17□□□□□ -0.14
SHOX2-202ENST00000425436 SCDO00767 359 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 SCO2O43819 266 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 FADS1O60427 444 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 WISP2O76076 250 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 LYPD3O95274 346 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 BCL10O95999 233 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 IGFBP1P08833 259 aaPredicted RBP14.16□□□□□ -0.14
SHOX2-202ENST00000425436 BMP7P18075 431 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 C21orf33P30042 268 aaPredicted RBP14.16□□□□□ -0.14
SHOX2-202ENST00000425436 EVI2BP34910 448 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 ACAA2P42765 397 aaKnown RBP14.16□□□□□ -0.14
SHOX2-202ENST00000425436 NUDT6P53370 316 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 RNFT1Q5M7Z0 435 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 OR5M10Q6IEU7 315 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 ACSM5Q6NUN0 579 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 MARCH3Q86UD3 253 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 OR52L1Q8NGH7 329 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 PLEKHA8Q96JA3 519 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 FAM173AQ9BQD7 235 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 EXOSC3Q9NQT5 275 aaKnown RBP14.16□□□□□ -0.14
SHOX2-202ENST00000425436 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHOX2-202ENST00000425436 ERGIC3Q9Y282 383 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 NCKAP5O14513 1909 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 PCNX3Q9H6A9 2034 aa14.16□□□□□ -0.14
SHOX2-202ENST00000425436 A0A1B0GWA3 101 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 ANKRD33BA6NCL7 494 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 GNB5O14775 395 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 PRODHO43272 600 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 LSM11P83369 360 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHOX2-202ENST00000425436 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHOX2-202ENST00000425436 TIGD6Q17RP2 521 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 GATSQ8NAP1 163 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 POGLUT1Q8NBL1 392 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 FAM98AQ8NCA5 519 aaKnown RBP14.15□□□□□ -0.14
SHOX2-202ENST00000425436 RNF217Q8TC41 542 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 LRR1Q96L50 414 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 FRMD6Q96NE9 622 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 RHNO1Q9BSD3 238 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 NAA50Q9GZZ1 169 aaKnown RBP14.15□□□□□ -0.14
SHOX2-202ENST00000425436 TSPAN10Q9H1Z9 355 aaPredicted RBP14.15□□□□□ -0.14
SHOX2-202ENST00000425436 EGLN3Q9H6Z9 239 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 ASF1BQ9NVP2 202 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 BAIAP2Q9UQB8 552 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 FAM166BA8MTA8 275 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 B8ZZF3 427 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 PRKYO43930 277 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 HCN1O60741 890 aa14.15□□□□□ -0.14
SHOX2-202ENST00000425436 BCAS1O75363 584 aaPredicted RBP14.15□□□□□ -0.14
SHOX2-202ENST00000425436 SNX4O95219 450 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms