RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 RPS3AP61247 264 aaKnown RBP24.05■■□□□ 1.44
LDB1-202ENST00000425280 TIMM50Q3ZCQ8 353 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 PHC2Q8IXK0 858 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 NDUFB11Q9NX14 153 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 TOR4AQ9NXH8 423 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 MED11Q9P086 117 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 HRH3Q9Y5N1 445 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 IDH3BO43837 385 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 MT-CO3P00414 261 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 CD63P08962 238 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 TSPAN19P0C672 248 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 ANKDD1AQ495B1 522 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 LIPKQ5VXJ0 399 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 TMEM99Q8N816 258 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 OR9Q1Q8NGQ5 310 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 CT55Q8WUE5 264 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 TMEM234Q8WY98 164 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 PTDSS2Q9BVG9 487 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 SPRY4Q9C004 299 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 ISYNA1Q9NPH2 558 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 PCDHGB6Q9Y5F9 930 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 NPIPB7O75200 414 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 ITGA10O75578 1167 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 GPX5O75715 221 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 IGHEP01854 428 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 CPEP16870 476 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 RPS18P62269 152 aaKnown RBP24.04■■□□□ 1.44
LDB1-202ENST00000425280 DGUOKQ16854 277 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 ALG10Q5BKT4 473 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 USP43Q70EL4 1123 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 NDUFAF7Q7L592 441 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 NANOGNBQ7Z5D8 188 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 NPEPL1Q8NDH3 523 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 ST8SIA1Q92185 356 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 RASD2Q96D21 266 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 DDOQ99489 341 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 ARHGAP9Q9BRR9 750 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 SPIN1Q9Y657 262 aaPredicted RBP24.04■■□□□ 1.44
LDB1-202ENST00000425280 PMF1-BGLAPU3KQ54 211 aa24.04■■□□□ 1.44
LDB1-202ENST00000425280 A0A1W2PQ72 361 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 C9orf172C9J069 976 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 CD14P08571 375 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 PRKCAP17252 672 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 TCN2P20062 427 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 HTR3AP46098 478 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 RPL18Q07020 188 aaKnown RBP24.03■■□□□ 1.44
LDB1-202ENST00000425280 ZNF791Q3KP31 576 aaPredicted RBP24.03■■□□□ 1.44
LDB1-202ENST00000425280 DNAJA3Q96EY1 480 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 METTL7AQ9H8H3 244 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 TCFL5Q9UL49 500 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 SLC6A5Q9Y345 797 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 ZNF318Q5VUA4 2279 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 C12orf71A8MTZ7 269 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 A8MVM7 634 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 HIST1H2ABP04908 130 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 ENTPD1P49961 510 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 NUBP1P53384 320 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 HIST3H2AQ7L7L0 130 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 FAM122BQ7Z309 247 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 KLHL36Q8N4N3 616 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 ACBD7Q8N6N7 88 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 HIST1H2ACQ93077 130 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 NMNAT3Q96T66 252 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 NPAS1Q99742 590 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 ADGRL4Q9HBW9 690 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 ZNF160Q9HCG1 818 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 HAO2Q9NYQ3 351 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 PPP4R1LQ9P1A2 415 aa24.03■■□□□ 1.44
LDB1-202ENST00000425280 NSG1A0A0A6YYJ2 146 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 INHBBP09529 407 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 CTXN1P60606 82 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 TUBA1BP68363 451 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 ARSKQ6UWY0 536 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 TUBA1AQ71U36 451 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 OR52N1Q8NH53 320 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 Q96M85 177 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 SEC14L4Q9UDX3 406 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 WIF1Q9Y5W5 379 aa24.02■■□□□ 1.44
LDB1-202ENST00000425280 TEX13CA0A0J9YWL9 993 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 F13BP05160 661 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 MRPL3P09001 348 aaKnown RBP24.01■■□□□ 1.43
LDB1-202ENST00000425280 APEHP13798 732 aaKnown RBP24.01■■□□□ 1.43
LDB1-202ENST00000425280 CRYBB2P43320 205 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 MOGQ16653 247 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 DHRS13Q6UX07 377 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 PPP1R32Q7Z5V6 425 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 KBTBD8Q8NFY9 601 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 ZPLD1Q8TCW7 415 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 CACNA1HO95180 2353 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 CCDC187A0A096LP49 1063 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 IGLV3-32A0A0A0MS00 114 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 IMPA2O14732 288 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 RAB40ALP0C0E4 278 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 SBK2P0C263 348 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 CASP3P42574 277 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 TPBGQ13641 420 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 C1orf140Q5VVS0 124 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 ADCK1Q86TW2 530 aa24.01■■□□□ 1.43
LDB1-202ENST00000425280 STK35Q8TDR2 534 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms