RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KDM4DQ6B0I6 523 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 OAFQ86UD1 273 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 TMEM99Q8N816 258 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 CYGBQ8WWM9 190 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ROBO4Q8WZ75 1007 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 SAMD8Q96LT4 415 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 DOCK7Q96N67 2140 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ADNPQ9H2P0 1102 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 NANSQ9NR45 359 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 PCDHGB5Q9Y5G0 923 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ETV2O00321 342 aaPredicted RBP12.07□□□□□ -0.48
PRPF39-202ENST00000424478 AHSA1O95433 338 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 EIF1P41567 113 aaKnown RBP12.07□□□□□ -0.48
PRPF39-202ENST00000424478 LHX2P50458 406 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 SELENBP1Q13228 472 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 FHL1Q13642 323 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 CTU2Q2VPK5 515 aaKnown RBP12.07□□□□□ -0.48
PRPF39-202ENST00000424478 SIAH3Q8IW03 269 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ABTB1Q969K4 478 aaPredicted RBP12.07□□□□□ -0.48
PRPF39-202ENST00000424478 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 PAPOLBQ9NRJ5 636 aaKnown RBP12.07□□□□□ -0.48
PRPF39-202ENST00000424478 SERINC1Q9NRX5 453 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 REV1Q9UBZ9 1251 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 SH3BGRL2Q9UJC5 107 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 A0A087WZY1 265 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 TTLL8A6PVC2 850 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 IMPA2O14732 288 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 BGLAPP02818 100 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 VHLP40337 213 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 HTR3AP46098 478 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 NUP107P57740 925 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 SMARCD3Q6STE5 483 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 NEIL3Q8TAT5 605 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 DDIT4LQ96D03 193 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 TIMP4Q99727 224 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 RBM4BQ9BQ04 359 aaKnown RBP12.06□□□□□ -0.48
PRPF39-202ENST00000424478 RBM4Q9BWF3 364 aaKnown RBP12.06□□□□□ -0.48
PRPF39-202ENST00000424478 UCK2Q9BZX2 261 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 CAMK2AQ9UQM7 478 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 TRAV36DV7A0A075B6V5 113 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 SULT2B1O00204 365 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 KLF4O43474 513 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 PRB1P04280 392 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 HYAL4Q2M3T9 481 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 SLC35F1Q5T1Q4 408 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.06□□□□□ -0.48
PRPF39-202ENST00000424478 GPAT4Q86UL3 456 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 OR10D3Q8NH80 312 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 TMEM43Q9BTV4 400 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 ANKRD19PQ9H560 264 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF556Q9HAH1 456 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 RBM34P42696 430 aaKnown RBP12.06□□□□□ -0.48
PRPF39-202ENST00000424478 CLDN18P56856 261 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 FGD2Q7Z6J4 655 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 CLDN22Q8N7P3 220 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 KLHL15Q96M94 604 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 HS6ST2Q96MM7 605 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 POLR2J2Q9GZM3 115 aaKnown RBP12.06□□□□□ -0.48
PRPF39-202ENST00000424478 MCCC2Q9HCC0 563 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 CLEC4AQ9UMR7 237 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 PCDHGB6Q9Y5F9 930 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 FREM1Q5H8C1 2179 aa12.06□□□□□ -0.48
PRPF39-202ENST00000424478 UNC119BA6NIH7 251 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 MCIDASD6RGH6 385 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 FTCDNL1E5RQL4 147 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 OR7A10O76100 309 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 HPRP00739 348 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 CHMP24386 653 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 IDUAP35475 653 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 RAC1P63000 192 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 TOP3AQ13472 1001 aaPredicted RBP12.05□□□□□ -0.48
PRPF39-202ENST00000424478 FAM69AQ5T7M9 428 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 FANK1Q8TC84 345 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 GNPDA2Q8TDQ7 276 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF570Q96NI8 536 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 GABARAPL1Q9H0R8 117 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 EVA1AQ9H8M9 152 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 MGAT4BQ9UQ53 548 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
PRPF39-202ENST00000424478 LIPT2A6NK58 231 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 ADORA3P0DMS8 318 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 HOXB6P17509 224 aaKnown RBP12.05□□□□□ -0.48
PRPF39-202ENST00000424478 TSPAN31Q12999 210 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 HBMQ6B0K9 141 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 CDK20Q8IZL9 346 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 NR4A3Q92570 626 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 OSTF1Q92882 214 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 OR52D1Q9H346 318 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 SMPD3Q9NY59 655 aaPredicted RBP12.05□□□□□ -0.48
PRPF39-202ENST00000424478 SIGLEC7Q9Y286 467 aa12.05□□□□□ -0.48
PRPF39-202ENST00000424478 SLC2A10O95528 541 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ANXA8P13928 327 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF17P17021 662 aa12.04□□□□□ -0.48
PRPF39-202ENST00000424478 ADH6P28332 368 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms