RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZIC1Q15915 447 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ARSKQ6UWY0 536 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 GFI1Q99684 422 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 MEPEQ9NQ76 525 aaPredicted RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 CMC2Q9NRP2 79 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 POT1Q9NUX5 634 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 NPFFR2Q9Y5X5 522 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ACOD1A6NK06 481 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 SLC22A31A6NKX4 558 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 PLRG1O43660 514 aaKnown RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 GBX2P52951 348 aaPredicted RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 UBE2MP61081 183 aaKnown RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 BTN3A2P78410 334 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 PITPNAQ00169 270 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 DPTQ07507 201 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 SLC22A10Q63ZE4 541 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 C3P1Q6ZMU1 363 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 CMIPQ8IY22 773 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ZNF433Q8N7K0 673 aaPredicted RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ZNRF4Q8WWF5 429 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 BPIFA2Q96DR5 249 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 PELI1Q96FA3 418 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 ZNF559Q9BR84 538 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 GPR174Q9BXC1 333 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 SLC17A9Q9BYT1 436 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 PPA2Q9H2U2 334 aa13.19□□□□□ -0.3
MSH5-206ENST00000423982 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
MSH5-206ENST00000423982 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 LPLP06858 475 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 PSMB1P20618 241 aaKnown RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 NT5EP21589 574 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 SLC2A5P22732 501 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 CDK3Q00526 305 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 MRPL2Q5T653 305 aaKnown RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 PRAMEF8Q5VWM4 474 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 PRAMEF7Q5VXH5 474 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 FBXW5Q969U6 566 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 OR1F2PQ96R84 312 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 MRPS30Q9NP92 439 aaKnown RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 SIGLEC7Q9Y286 467 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 PCDHGA5Q9Y5G8 931 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 MFSD2BA6NFX1 497 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 GNB5O14775 395 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 NDUFS1P28331 727 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 DCTDP32321 178 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 RPS21P63220 83 aaKnown RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 EEF1A1P68104 462 aaKnown RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 LINC00303Q3SY05 128 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 TRMT12Q53H54 448 aaKnown RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 FAM199XQ6PEV8 388 aaPredicted RBP13.18□□□□□ -0.3
MSH5-206ENST00000423982 FAM198BQ6UWH4 519 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 FCRLAQ7L513 359 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 SDR9C7Q8NEX9 313 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 OR2L5Q8NG80 312 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 COX14Q96I36 57 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 PCBD2Q9H0N5 130 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 ZNF780BQ9Y6R6 833 aa13.18□□□□□ -0.3
MSH5-206ENST00000423982 TRAPPC13A5PLN9 417 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 POM121BA6NF01 834 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 L7N2F9 121 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 LYPD3O95274 346 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 GRPRP30550 384 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 C2orf68Q2NKX9 166 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 HEPHL1Q6MZM0 1159 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 ASPGQ86U10 573 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 UXS1Q8NBZ7 420 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 NR4A3Q92570 626 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 SLC25A38Q96DW6 304 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 SDF2Q99470 211 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 MTHFD2LQ9H903 347 aaPredicted RBP13.17□□□□□ -0.3
MSH5-206ENST00000423982 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 NOX4Q9NPH5 578 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 CALML5Q9NZT1 146 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 ABCA7Q8IZY2 2146 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 H3BSH0 61 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 H3BUI4 141 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 PIN1P1O15428 100 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 NMBP08949 121 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 NUP62P37198 522 aaPredicted RBP13.17□□□□□ -0.3
MSH5-206ENST00000423982 RAG2P55895 527 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 RPE65Q16518 533 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 FIGNL1Q6PIW4 674 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 ZNF765Q7L2R6 523 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 SLITRK4Q8IW52 837 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 TMEFF1Q8IYR6 380 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 NOX3Q9HBY0 568 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 ABRACLQ9P1F3 81 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms