RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 KLK2P20151 261 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 FPR1P21462 350 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 LIMS1P48059 325 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 AGFG1P52594 562 aaKnown RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 LSM11P83369 360 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 SEC23BQ15437 767 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF730Q6ZMV8 503 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 SEM1Q6ZVN7 128 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 MBOAT2Q6ZWT7 520 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 MARVELD2Q8N4S9 558 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 OR52J3Q8NH60 311 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 MBD3L2Q8NHZ7 208 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 WNT2BQ93097 391 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 ZHX1-C8orf76Q96EF9 292 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 TTYH2Q9BSA4 534 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 TAPBPLQ9BX59 468 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 KLHL4Q9C0H6 718 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 AP4S1Q9Y587 144 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 MED12LQ86YW9 2145 aa15.2■□□□□ 0.02
COL7A1-202ENST00000422991 USP9XQ93008 2570 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-202ENST00000422991 IGHV3-15A0A0B4J1V0 119 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 A0A1B0GUH1 482 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 SH3PXD2BA1X283 911 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 CLEC18AA5D8T8 446 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 EIF1BO60739 113 aaKnown RBP15.19■□□□□ 0.02
COL7A1-202ENST00000422991 TIPRLO75663 272 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 AQP8O94778 261 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 GLI4P10075 376 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 ENPP1P22413 925 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 HMGA2P52926 109 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 H3F3AP84243 136 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 LTBQ06643 244 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 MFSD13AQ14CX5 517 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF74Q16587 644 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 C4orf17Q53FE4 359 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 ABLIM2Q6H8Q1 611 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 PPP4R4Q6NUP7 873 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 TBPL2Q6SJ96 375 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 PAQR6Q6TCH4 344 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 CLEC18BQ6UXF7 455 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 SLC46A3Q7Z3Q1 461 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 NRMQ8IXM6 262 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 RNF113BQ8IZP6 322 aaKnown RBP15.19■□□□□ 0.02
COL7A1-202ENST00000422991 C9orf106Q8NAJ2 232 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 CLEC18CQ8NCF0 446 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 OR4C15Q8NGM1 316 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 RNF128Q8TEB7 428 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 PYDC1Q8WXC3 89 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 SLC25A36Q96CQ1 311 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 MOGAT1Q96PD6 335 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 TM9SF2Q99805 663 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 REEP1Q9H902 201 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 C20orf141Q9NUB4 165 aa15.19■□□□□ 0.02
COL7A1-202ENST00000422991 HTR3EA5X5Y0 456 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 ZNF814B7Z6K7 855 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 LRRN3E7EW58 273 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 TNFRSF11BO00300 401 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 CCL21O00585 134 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 RRP9O43818 475 aaKnown RBP15.18■□□□□ 0.02
COL7A1-202ENST00000422991 ENTPD5O75356 428 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 CH25HO95992 272 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 MT-ATP6P00846 226 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 GTF2E2P29084 291 aaKnown RBP15.18■□□□□ 0.02
COL7A1-202ENST00000422991 GRPRP30550 384 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 CTBP2P56545 445 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 NUP107P57740 925 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 PRKCDQ05655 676 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 EXOC3L2Q2M3D2 409 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 ZFP1Q6P2D0 407 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 NCCRP1Q6ZVX7 275 aaPredicted RBP15.18■□□□□ 0.02
COL7A1-202ENST00000422991 FCRLAQ7L513 359 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 P4HA3Q7Z4N8 544 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 FJX1Q86VR8 437 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 C10orf53Q8N6V4 93 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 OR4K5Q8NGD3 323 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 ROBO4Q8WZ75 1007 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 SGTBQ96EQ0 304 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 ALPK1Q96QP1 1244 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 PRRG4Q9BZD6 226 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 FKRPQ9H9S5 495 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 RNF122Q9H9V4 155 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 DNAJB9Q9UBS3 223 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 SAMHD1Q9Y3Z3 626 aaKnown RBP15.18■□□□□ 0.02
COL7A1-202ENST00000422991 LRRK2Q5S007 2527 aa15.18■□□□□ 0.02
COL7A1-202ENST00000422991 NCOA6Q14686 2063 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 AQP7P3A6NL99 342 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 H3BNX3 289 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 M0R082 166 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 CLOCKO15516 846 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 LRRTM2O43300 516 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 HNRNPRO43390 633 aaKnown RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 CYTIPO60759 359 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 DEAF1O75398 565 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-202ENST00000422991 OR7A10O76100 309 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 TOXO94900 526 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 AKR7A3O95154 331 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 FCGR1AP12314 374 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 IFI30P13284 250 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 CBLP22681 906 aa15.17■□□□□ 0.02
COL7A1-202ENST00000422991 CEACAM8P31997 349 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms