RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TMEM99Q8N816 258 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 ZNF610Q8N9Z0 462 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 MFSD8Q8NHS3 518 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 NSMCE2Q96MF7 247 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 ZNF300Q96RE9 604 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-202ENST00000421712 PSD2Q9BQI7 771 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 GP6Q9HCN6 339 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 NPDC1Q9NQX5 325 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-202ENST00000421712 TAS2R1Q9NYW7 299 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 EMC3Q9P0I2 261 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 RIMS3Q9UJD0 308 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 FOXD3Q9UJU5 478 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-202ENST00000421712 SAMD4AQ9UPU9 718 aaKnown RBP14.04□□□□□ -0.16
BRAT1-202ENST00000421712 SNX13Q9Y5W8 968 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 V9GYQ6 96 aa14.04□□□□□ -0.16
BRAT1-202ENST00000421712 A8MXE2 369 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 ARPC2O15144 300 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 NPIPB7O75200 414 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 PDE5AO76074 875 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 IL1RL1Q01638 556 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 SNTB1Q13884 538 aaKnown RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 GUSBP1Q15486 140 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 NUFIP2Q7Z417 695 aaKnown RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 GPAT4Q86UL3 456 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 KIF18BQ86Y91 864 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 TAAR8Q969N4 342 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 THTPAQ9BU02 230 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 AMBRA1Q9C0C7 1298 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 POLR2J2Q9GZM3 115 aaKnown RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 POLR2J3Q9H1A7 115 aaKnown RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 C1orf21Q9H246 121 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 GORASP2Q9H8Y8 452 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 PLSCR4Q9NRQ2 329 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 DCAF13Q9NV06 445 aaKnown RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 JKAMPQ9P055 326 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 PRPF19Q9UMS4 504 aaKnown RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 HCFC1P51610 2035 aa14.03□□□□□ -0.16
BRAT1-202ENST00000421712 USP9YO00507 2555 aaPredicted RBP14.03□□□□□ -0.16
BRAT1-202ENST00000421712 IGKV1D-42A0A075B6H8 117 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF814B7Z6K7 855 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 KPNA4O00629 521 aaPredicted RBP14.02□□□□□ -0.17
BRAT1-202ENST00000421712 RAMP1O60894 148 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 OR5F1O95221 314 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 STAMBPO95630 424 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 CD8BP10966 210 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 H3F3AP84243 136 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 FAM69AQ5T7M9 428 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF787Q6DD87 383 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 ABLIM2Q6H8Q1 611 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 GALNT5Q7Z7M9 940 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 TSPYL5Q86VY4 417 aaPredicted RBP14.02□□□□□ -0.17
BRAT1-202ENST00000421712 CYP4Z1Q86W10 505 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF100Q8IYN0 542 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 MPP4Q96JB8 637 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 TMEM43Q9BTV4 400 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 PTDSS2Q9BVG9 487 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 FNDC11Q9BVV2 318 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 ASPNQ9BXN1 380 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 BCO1Q9HAY6 547 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 GALNT8Q9NY28 637 aa14.02□□□□□ -0.17
BRAT1-202ENST00000421712 NOSIPQ9Y314 301 aaKnown RBP14.02□□□□□ -0.17
BRAT1-202ENST00000421712 FAM32AQ9Y421 112 aaKnown RBP14.02□□□□□ -0.17
BRAT1-202ENST00000421712 AQP7P3A6NL99 342 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF724A8MTY0 619 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 J3KTA2 159 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 GPR171O14626 319 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 CGAP01215 116 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 THY1P04216 161 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 POU2F1P14859 743 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 NQO1P15559 274 aaKnown RBP14.01□□□□□ -0.17
BRAT1-202ENST00000421712 GRPRP30550 384 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 ST3GAL3Q11203 375 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 MFSD13AQ14CX5 517 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 PDK3Q15120 406 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 FBXL19-AS1Q494R0 122 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 DNAL1Q4LDG9 190 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 CYP2R1Q6VVX0 501 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 LINC00114Q6XXX2 140 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 WDR88Q6ZMY6 472 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 PYURFQ96I23 114 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 PRRC1Q96M27 445 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 KLHL4Q9C0H6 718 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 FANCFQ9NPI8 374 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 RHCGQ9UBD6 479 aa14.01□□□□□ -0.17
BRAT1-202ENST00000421712 FTCDNL1E5RQL4 147 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 HNRNPRO43390 633 aaKnown RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 MRPL33O75394 65 aaKnown RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 LYPD3O95274 346 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 CH25HO95992 272 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 HIST1H2ABP04908 130 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 FAM27E3Q08E93 113 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 ZNF474Q6S9Z5 364 aaPredicted RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 BEND4Q6ZU67 534 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 H1FNTQ75WM6 255 aaPredicted RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 HIST3H2AQ7L7L0 130 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 ZC3HAV1Q7Z2W4 902 aaKnown RBP14□□□□□ -0.17
BRAT1-202ENST00000421712 DHFR2Q86XF0 187 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 NKAIN4Q8IVV8 208 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 UBE2J2Q8N2K1 259 aa14□□□□□ -0.17
BRAT1-202ENST00000421712 KDM8Q8N371 416 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms