RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ACSM3Q53FZ2 586 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 COL13A1Q5TAT6 717 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 TMEM53Q6P2H8 277 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 MTFR2Q6P444 385 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZNF517Q6ZMY9 492 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 NR2C2APQ86WQ0 139 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 PLXDC1Q8IUK5 500 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ARIH2OSQ8N7S6 290 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 LSMEM1Q8N8F7 131 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 SCAIQ8N9R8 606 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 IL17RDQ8NFM7 739 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ABHD4Q8TB40 342 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ENKURQ8TC29 256 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 MSANTD3Q96H12 275 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TIMP4Q99727 224 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ATF6BQ99941 703 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TBL1XR1Q9BZK7 514 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 LANCL2Q9NS86 450 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 EXTL2Q9UBQ6 330 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 SERTAD3Q9UJW9 196 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZMIZ1Q9ULJ6 1067 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 RASD1Q9Y272 281 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 MUC3AQ02505 3323 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 PI4KAP42356 2102 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ANKRD61A6NGH8 418 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZNF264O43296 627 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 PSKH1P11801 424 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 SDHBP21912 280 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 MYL9P24844 172 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 EDNRAP25101 427 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 CSF2RBP32927 897 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 CASP3P42574 277 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 SMAD2Q15796 467 aaKnown RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 CLPPQ16740 277 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 JAZF1Q86VZ6 243 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 RAB43Q86YS6 212 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 GRAMD2AQ8IUY3 354 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ZNF433Q8N7K0 673 aaPredicted RBP10.01□□□□□ -0.81
DDX56-203ENST00000421223 ERVMER34-1Q9H9K5 563 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 ISYNA1Q9NPH2 558 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 GMEB2Q9UKD1 530 aa10.01□□□□□ -0.81
DDX56-203ENST00000421223 TRBV2A0A0J9YWF9 115 aa10□□□□□ -0.81
DDX56-203ENST00000421223 EFCAB7A8K855 629 aa10□□□□□ -0.81
DDX56-203ENST00000421223 NPIPB9F8W1W9 429 aa10□□□□□ -0.81
DDX56-203ENST00000421223 H0YIG0 161 aa10□□□□□ -0.81
DDX56-203ENST00000421223 GPANK1O95872 356 aa10□□□□□ -0.81
DDX56-203ENST00000421223 CXCL12P48061 93 aa10□□□□□ -0.81
DDX56-203ENST00000421223 RFX2P48378 723 aa10□□□□□ -0.81
DDX56-203ENST00000421223 AFF3P51826 1226 aaKnown RBP10□□□□□ -0.81
DDX56-203ENST00000421223 PLCXD2Q0VAA5 305 aa10□□□□□ -0.81
DDX56-203ENST00000421223 MZT2AQ6P582 158 aa10□□□□□ -0.81
DDX56-203ENST00000421223 XKRXQ6PP77 449 aa10□□□□□ -0.81
DDX56-203ENST00000421223 CEP76Q8TAP6 659 aa10□□□□□ -0.81
DDX56-203ENST00000421223 KTI12Q96EK9 354 aaPredicted RBP10□□□□□ -0.81
DDX56-203ENST00000421223 LCORQ96JN0 433 aaPredicted RBP10□□□□□ -0.81
DDX56-203ENST00000421223 CNN2Q99439 309 aaKnown RBP10□□□□□ -0.81
DDX56-203ENST00000421223 ACOXLQ9NUZ1 547 aa10□□□□□ -0.81
DDX56-203ENST00000421223 HLA-DQA2P01906 255 aa10□□□□□ -0.81
DDX56-203ENST00000421223 HIST1H2ABP04908 130 aa10□□□□□ -0.81
DDX56-203ENST00000421223 KRT8P05787 483 aa10□□□□□ -0.81
DDX56-203ENST00000421223 GSTT2P0CG29 244 aa10□□□□□ -0.81
DDX56-203ENST00000421223 GSTT2BP0CG30 244 aa10□□□□□ -0.81
DDX56-203ENST00000421223 ELK1P19419 428 aa10□□□□□ -0.81
DDX56-203ENST00000421223 RCVRNP35243 200 aa10□□□□□ -0.81
DDX56-203ENST00000421223 RBM34P42696 430 aaKnown RBP10□□□□□ -0.81
DDX56-203ENST00000421223 EFNA3P52797 238 aa10□□□□□ -0.81
DDX56-203ENST00000421223 PPP3R1P63098 170 aa10□□□□□ -0.81
DDX56-203ENST00000421223 FHL1Q13642 323 aa10□□□□□ -0.81
DDX56-203ENST00000421223 SLC25A35Q3KQZ1 300 aa10□□□□□ -0.81
DDX56-203ENST00000421223 KLHL26Q53HC5 615 aa10□□□□□ -0.81
DDX56-203ENST00000421223 ALG10Q5BKT4 473 aa10□□□□□ -0.81
DDX56-203ENST00000421223 HIST3H2AQ7L7L0 130 aa10□□□□□ -0.81
DDX56-203ENST00000421223 SLC35F2Q8IXU6 374 aa10□□□□□ -0.81
DDX56-203ENST00000421223 CADM4Q8NFZ8 388 aa10□□□□□ -0.81
DDX56-203ENST00000421223 FAM174AQ8TBP5 190 aa10□□□□□ -0.81
DDX56-203ENST00000421223 HIST1H2ACQ93077 130 aa10□□□□□ -0.81
DDX56-203ENST00000421223 HOXD1Q9GZZ0 328 aa10□□□□□ -0.81
DDX56-203ENST00000421223 SIAEQ9HAT2 523 aa10□□□□□ -0.81
DDX56-203ENST00000421223 COPS7AQ9UBW8 275 aa10□□□□□ -0.81
DDX56-203ENST00000421223 CHRNA9Q9UGM1 479 aa10□□□□□ -0.81
DDX56-203ENST00000421223 ING1Q9UK53 422 aaPredicted RBP10□□□□□ -0.81
DDX56-203ENST00000421223 GTF2A1LQ9UNN4 478 aa10□□□□□ -0.81
DDX56-203ENST00000421223 AK6Q9Y3D8 172 aaKnown RBP10□□□□□ -0.81
DDX56-203ENST00000421223 ZNF337Q9Y3M9 751 aa10□□□□□ -0.81
DDX56-203ENST00000421223 A0A0G2JMP0 313 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 A0A0X1KG70 313 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 J3QRE1 110 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 OR7A10O76100 309 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 WISP1O95388 367 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 F8A1P23610 371 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 CXCR1P25024 350 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 CDKN2AP42771 156 aaKnown RBP9.99□□□□□ -0.81
DDX56-203ENST00000421223 PPICP45877 212 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
DDX56-203ENST00000421223 LGALS3BPQ08380 585 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 GLYR1Q49A26 553 aaPredicted RBP9.99□□□□□ -0.81
DDX56-203ENST00000421223 FAM69BQ5VUD6 431 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 WBP2NLQ6ICG8 309 aa9.99□□□□□ -0.81
DDX56-203ENST00000421223 CD200R1LQ6Q8B3 271 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms