RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TSPAN31Q12999 210 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 DAG1Q14118 895 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 MFSD13AQ14CX5 517 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 OR7A5Q15622 319 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 PDSS1Q5T2R2 415 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 KDM4DQ6B0I6 523 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 HBMQ6B0K9 141 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 ARHGAP11AQ6P4F7 1023 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 CD300LDQ6UXZ3 194 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 FGD2Q7Z6J4 655 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 CHERPQ8IWX8 916 aaKnown RBP11.21□□□□□ -0.61
TMEM53-206ENST00000420706 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 C10orf53Q8N6V4 93 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 LRRC17Q8N6Y2 441 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 ATG16L2Q8NAA4 619 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 OR2V1Q8NHB1 315 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
TMEM53-206ENST00000420706 OSTF1Q92882 214 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 GTPBP3Q969Y2 492 aaKnown RBP11.21□□□□□ -0.61
TMEM53-206ENST00000420706 SARAFQ96BY9 339 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 RBM4BQ9BQ04 359 aaKnown RBP11.21□□□□□ -0.61
TMEM53-206ENST00000420706 SLX1AQ9BQ83 275 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 RBM4Q9BWF3 364 aaKnown RBP11.21□□□□□ -0.61
TMEM53-206ENST00000420706 TAPBPLQ9BX59 468 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 RASSF4Q9H2L5 321 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 FKRPQ9H9S5 495 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 NANSQ9NR45 359 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 USE1Q9NZ43 259 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 TMEFF2Q9UIK5 374 aaPredicted RBP11.21□□□□□ -0.61
TMEM53-206ENST00000420706 ZNF229Q9UJW7 825 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 PKD1L2Q7Z442 2459 aa11.21□□□□□ -0.61
TMEM53-206ENST00000420706 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.62
TMEM53-206ENST00000420706 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 OR14I1A6ND48 311 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 NPIPA2E9PIF3 369 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 NPIPA3F8WFD2 350 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 MITFO75030 526 aaPredicted RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 TP53P04637 393 aaPredicted RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 ALPLP05186 524 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 SAGP10523 405 aaPredicted RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 GSTM3P21266 225 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 GRPRP30550 384 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 SLC9A3P48764 834 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 ALDH3A2P51648 485 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 RAC3P60763 192 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 RPS3AP61247 264 aaKnown RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 CSNK2A1P68400 391 aaPredicted RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 SLC35A1P78382 337 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 COX10Q12887 443 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 NFATC3Q12968 1075 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 FHL1Q13642 323 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 KLHL17Q6TDP4 642 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 MAMDC2Q7Z304 686 aaPredicted RBP11.2□□□□□ -0.62
TMEM53-206ENST00000420706 GALNT4Q8N4A0 578 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 OR10D3Q8NH80 312 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 TNFRSF13CQ96RJ3 184 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 SRXN1Q9BYN0 137 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 UCK2Q9BZX2 261 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 PRDM14Q9GZV8 571 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 ZNF556Q9HAH1 456 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 C8orf4Q9NR00 106 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 ALKBH4Q9NXW9 302 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 REV1Q9UBZ9 1251 aa11.2□□□□□ -0.62
TMEM53-206ENST00000420706 CXCL13O43927 109 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 AKR7A3O95154 331 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 HPRP00739 348 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 HIST1H2ABP04908 130 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 PTGS2P35354 604 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 EIF1AXP47813 144 aaKnown RBP11.19□□□□□ -0.62
TMEM53-206ENST00000420706 AGFG1P52594 562 aaKnown RBP11.19□□□□□ -0.62
TMEM53-206ENST00000420706 MLLT10P55197 1068 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 NUP107P57740 925 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 IL1RL1Q01638 556 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 SNCBQ16143 134 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 C3AR1Q16581 482 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 SGCBQ16585 318 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 ZNF239Q16600 458 aaKnown RBP11.19□□□□□ -0.62
TMEM53-206ENST00000420706 ZBED5Q49AG3 693 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 GXYLT1Q4G148 440 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 RASSF6Q6ZTQ3 369 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 HIST3H2AQ7L7L0 130 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 OAFQ86UD1 273 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 PACRGLQ8N7B6 248 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 TMEM99Q8N816 258 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 OR13C2Q8NGS9 318 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 OR5J2Q8NH18 312 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 OR51A7Q8NH64 312 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 DNAJC9Q8WXX5 260 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 HIST1H2ACQ93077 130 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 ZNF845Q96IR2 970 aaPredicted RBP11.19□□□□□ -0.62
TMEM53-206ENST00000420706 ASPNQ9BXN1 380 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 PAPOLBQ9NRJ5 636 aaKnown RBP11.19□□□□□ -0.62
TMEM53-206ENST00000420706 KRT84Q9NSB2 600 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 MRPL39Q9NYK5 338 aaKnown RBP11.19□□□□□ -0.62
TMEM53-206ENST00000420706 KIF17Q9P2E2 1029 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 SEC14L4Q9UDX3 406 aa11.19□□□□□ -0.62
TMEM53-206ENST00000420706 CAMK2AQ9UQM7 478 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms