RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MAMDC2Q7Z304 686 aaPredicted RBP12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR2T33Q8NG76 320 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 TEX47Q8TBZ9 253 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 RNF217Q8TC41 542 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 TAAR8Q969N4 342 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF566Q969W8 418 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 TEX12Q9BXU0 123 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 POLDIP3Q9BY77 421 aaKnown RBP12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 MCCC2Q9HCC0 563 aa12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
SHMT1P1-201ENST00000419974 CFAP46Q8IYW2 2715 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 LOC102725191A0A1B0GVB3 256 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR2M5A3KFT3 312 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 PINLYPA6NC86 204 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 NPIPB13A6NJU9 1138 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 NPIPB4C9JG80 1138 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 H3BN98 237 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 BHLHE40O14503 412 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 IMPA2O14732 288 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 C1QL1O75973 258 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 NDUFB2O95178 105 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 AHSA1O95433 338 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 PMS2P2O95744 297 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 SAGP10523 405 aaPredicted RBP12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 GFRA1P56159 465 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 INAQ16352 499 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 BCL2A1Q16548 175 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 SGCBQ16585 318 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 KRT80Q6KB66 452 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 DPY19L2P2Q6ZN68 376 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC22A16Q86VW1 577 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 FAM26EQ8N5C1 309 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 MIB2Q96AX9 1013 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 NPAS1Q99742 590 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 TTTY12Q9BZ98 90 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 NDEL1Q9GZM8 345 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR52D1Q9H346 318 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 TUBD1Q9UJT1 453 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 DKKL1Q9UK85 242 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 B3GALT5Q9Y2C3 310 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
SHMT1P1-201ENST00000419974 MED13Q9UHV7 2174 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZC3H12DA2A288 527 aaKnown RBP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 LIPT2A6NK58 231 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 MKRN2OSH3BPM6 223 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 KPNA4O00629 521 aaPredicted RBP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 TXNDC12O95881 172 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 CH25HO95992 272 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 CCDC159P0C7I6 412 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 RFPL3SP0C7P2 107 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 PEPDP12955 493 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC6A6P31641 620 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 GRK5P34947 590 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 CHN2P52757 468 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 IL1RL1Q01638 556 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 GINS1Q14691 196 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 MAD2L1BPQ15013 274 aaPredicted RBP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 TMEM201Q5SNT2 666 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 Q6ZS92 163 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 GALNTL5Q7Z4T8 443 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF843Q8N446 348 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZADH2Q8N4Q0 377 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 LRRC75AQ8NAA5 344 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 FAM98AQ8NCA5 519 aaKnown RBP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR52L1Q8NGH7 329 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR8D4Q8NGM9 314 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR13C2Q8NGS9 318 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 FANK1Q8TC84 345 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 MOGAT1Q96PD6 335 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 TSSK6Q9BXA6 273 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 FN3KQ9H479 309 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 EGLN3Q9H6Z9 239 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZDHHC11Q9H8X9 412 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 NRIP3Q9NQ35 241 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 COL6A6A6NMZ7 2263 aa12.85□□□□□ -0.35
SHMT1P1-201ENST00000419974 GMFGO60234 142 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 SOX14O95416 240 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 CLIC3O95833 236 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 PRB1P04280 392 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 IDUAP35475 653 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 PCYT1AP49585 367 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 MEOX1P50221 254 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 ST13P50502 369 aaKnown RBP12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 GPR85P60893 370 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 H3F3AP84243 136 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 CD47Q08722 323 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 FOXD4Q12950 439 aaPredicted RBP12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 CDK5R2Q13319 367 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 TOP3AQ13472 1001 aaPredicted RBP12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 OCLNQ16625 522 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms